RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PPIAL4CA0A0B4J2A2 164 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 LOC100506127A0A0U1RQW1 187 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 CD8B2A6NJW9 211 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 SMLR1H3BR10 107 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 OR7A17O14581 309 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 ATP6V0E1O15342 81 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 PPIHO43447 177 aaKnown RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 KIAA0513O60268 411 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 STX11O75558 287 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 TRMUO75648 421 aaKnown RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 KRT33AO76009 404 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 AGTP01019 485 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 OXTP01178 125 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 SERPIND1P05546 499 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 HOXD4P09016 255 aaPredicted RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 UBTFL1P0CB47 393 aaPredicted RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 PPIAL4GP0DN37 164 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 GCAP28676 217 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 HTR2BP41595 481 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 CRISP1P54107 249 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 RAB11AP62491 216 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 BST2Q10589 180 aaKnown RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 BNIP1Q12981 228 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 TRDNQ13061 729 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 MADCAM1Q13477 382 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 ART3Q13508 389 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 FHL2Q14192 279 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 GRB7Q14451 532 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 FASTKD3Q14CZ7 662 aaKnown RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 RAB11BQ15907 218 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 FAM83EQ2M2I3 478 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 Q3ZCU0 254 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 TDRD12Q587J7 1177 aaKnown RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 ENPP6Q6UWR7 440 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 DBX2Q6ZNG2 339 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 HSD11B1LQ7Z5J1 315 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 OR4N5Q8IXE1 308 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 ZFP41Q8N8Y5 198 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 NECAB1Q8N987 351 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 OR2T6Q8NHC8 308 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 NSL1Q96IY1 281 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 TBX15Q96SF7 602 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 SLC6A7Q99884 636 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 NEURL2Q9BR09 285 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 BEX2Q9BXY8 128 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 PNNQ9H307 717 aaKnown RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 OR51M1Q9H341 326 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 ELOVL6Q9H5J4 265 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 XKR8Q9H6D3 395 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 GHRLQ9UBU3 117 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 VDAC3Q9Y277 283 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 POFUT2Q9Y2G5 429 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 RNF123Q5XPI4 1314 aa2.26□□□□□ -2.05
XRN1-210ENST00000472697 TNRC18O15417 2968 aaPredicted RBP2.26□□□□□ -2.05
XRN1-210ENST00000472697 IGLV3-22A0A075B6J6 115 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 A0A1B0GW55 424 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 FBLL1A6NHQ2 334 aaKnown RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 A8MXQ7 604 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 PRAC2D3DTV9 90 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 H3BTX0 84 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 CLDN5O00501 218 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 CDK2AP2O75956 126 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 ATP5LO75964 103 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 C1orf105O95561 183 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 SYF2O95926 243 aaKnown RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 JCHAINP01591 159 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 GSTA2P09210 222 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L2P0CJ85 424 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L3P0CJ86 424 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L4P0CJ87 422 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L5P0CJ88 424 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L6P0CJ89 424 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L7P0CJ90 424 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 STAG3L2P0CL84 134 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 RBMY1CP0DJD4 496 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 MBL2P11226 248 aaPredicted RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 GP9P14770 177 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 CD1DP15813 335 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 TBXA2RP21731 343 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 OPRL1P41146 370 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 STARP49675 285 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 ERVK-8P63133 956 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 ZNF85Q03923 595 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 ZFP36L1Q07352 338 aaKnown RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 RBBP4Q09028 425 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 NCBP1Q09161 790 aaKnown RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 GPR17Q13304 367 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 TMEM225Q6GV28 225 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 ZNF549Q6P9A3 640 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 DUX4L9Q6RFH8 374 aaPredicted RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 BTNL3Q6UXE8 466 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 FCRLAQ7L513 359 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 NDUFAF7Q7L592 441 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 NET1Q7Z628 596 aaPredicted RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 TPRA1Q86W33 373 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 ERI1Q8IV48 349 aaKnown RBP2.25□□□□□ -2.05
XRN1-210ENST00000472697 CD302Q8IX05 232 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 PQLC3Q8N755 202 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 OR13F1Q8NGS4 319 aa2.25□□□□□ -2.05
XRN1-210ENST00000472697 LKAAEAR1Q8TD35 194 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms