RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 IGF2P01344 180 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 MSX1P28360 303 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 GIPRP48546 466 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 FBXW4P57775 412 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 SNRPGP62308 76 aaKnown RBP17.12■□□□□ 0.33
ABCF3-207ENST00000468892 ZNF117Q03924 483 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 GINS1Q14691 196 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 C12orf73Q69YU5 71 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 ZNF773Q6PK81 442 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 Q6ZPB1 254 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-207ENST00000468892 OR52L1Q8NGH7 329 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 OR8J1Q8NGP2 316 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 CNIH3Q8TBE1 160 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 SPACA9Q96E40 222 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-207ENST00000468892 RASL10BQ96S79 203 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 TMEM43Q9BTV4 400 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 FAM192AQ9GZU8 254 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 PLCXD1Q9NUJ7 323 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 TBC1D23Q9NUY8 699 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 IL20Q9NYY1 176 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 CDH10Q9Y6N8 788 aa17.12■□□□□ 0.33
ABCF3-207ENST00000468892 A6NHS1 94 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 EFCAB9A8MZ26 197 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 PIP5K1CO60331 668 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 CDC40O60508 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
ABCF3-207ENST00000468892 HCN1O60741 890 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 FAM20BO75063 409 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 ADAM11O75078 769 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 SMNDC1O75940 238 aaKnown RBP eCLIP17.11■□□□□ 0.33
ABCF3-207ENST00000468892 HMGN1P05114 100 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 SAGP10523 405 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-207ENST00000468892 BMP7P18075 431 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 GPR4P46093 362 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 HTR3AP46098 478 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 SSR4P51571 173 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 GABREP78334 506 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 CDK5Q00535 292 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 NTRK2Q16620 822 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 WDR88Q6ZMY6 472 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 CYP4Z2PQ8N1L4 340 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 OR5M3Q8NGP4 307 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 BRIX1Q8TDN6 353 aaKnown RBP17.11■□□□□ 0.33
ABCF3-207ENST00000468892 ASB15Q8WXK1 588 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 C3orf49Q96BT1 292 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 ARSGQ96EG1 525 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 SH3YL1Q96HL8 342 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-207ENST00000468892 SECISBP2Q96T21 854 aaKnown RBP17.11■□□□□ 0.33
ABCF3-207ENST00000468892 GPA33Q99795 319 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 ICAM5Q9UMF0 924 aa17.11■□□□□ 0.33
ABCF3-207ENST00000468892 VPS13AQ96RL7 3174 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 TRIM64CA6NLI5 447 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 SNTNA6NMZ2 147 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-207ENST00000468892 ITGA10O75578 1167 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-207ENST00000468892 FMO3P31513 532 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 SLC9A3P48764 834 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 SNTA1Q13424 505 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 TMEM236Q5W0B7 351 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 CBLN3Q6UW01 205 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 ZNF620Q6ZNG0 422 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 C16orf47Q6ZP98 133 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-207ENST00000468892 RPS19BP1Q86WX3 136 aaKnown RBP17.1■□□□□ 0.33
ABCF3-207ENST00000468892 CCDC71Q8IV32 467 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-207ENST00000468892 ARMC10Q8N2F6 343 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 DUSP19Q8WTR2 217 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 KIAA1143Q96AT1 154 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-207ENST00000468892 SGTBQ96EQ0 304 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 NDEL1Q9GZM8 345 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 METTL7AQ9H8H3 244 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 KLRF1Q9NZS2 232 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 FBXL4Q9UKA2 621 aa17.1■□□□□ 0.33
ABCF3-207ENST00000468892 KPNA4O00629 521 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-207ENST00000468892 OIP5O43482 229 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 CXCR1P25024 350 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 RPS18P62269 152 aaKnown RBP17.09■□□□□ 0.33
ABCF3-207ENST00000468892 LSM11P83369 360 aaKnown RBP eCLIP17.09■□□□□ 0.33
ABCF3-207ENST00000468892 CHAF1BQ13112 559 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 TMEM44Q2T9K0 475 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 MEDAGQ5VYS4 303 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 DESI1Q6ICB0 168 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 JMJD6Q6NYC1 403 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-207ENST00000468892 LYPD8Q6UX82 237 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 ATG4DQ86TL0 474 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-207ENST00000468892 KIF18BQ86Y91 864 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 ZNF540Q8NDQ6 660 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 OR2T33Q8NG76 320 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 PFN4Q8NHR9 129 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 FANK1Q8TC84 345 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 RNF138Q8WVD3 245 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 MYDGFQ969H8 173 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 PLEKHA8Q96JA3 519 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 NODALQ96S42 347 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 TSSK6Q9BXA6 273 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 POLDIP3Q9BY77 421 aaKnown RBP17.09■□□□□ 0.33
ABCF3-207ENST00000468892 DPH1Q9BZG8 443 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 ADAM19Q9H013 955 aa17.09■□□□□ 0.33
ABCF3-207ENST00000468892 MED17Q9NVC6 651 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms