RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SCYL2Q6P3W7 929 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 CYS1Q717R9 158 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 BZW1Q7L1Q6 419 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 PRSS48Q7RTY5 328 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 NUFIP2Q7Z417 695 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 HSD11B1LQ7Z5J1 315 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 CARM1Q86X55 608 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 TGIF2LXQ8IUE1 241 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 EGFL6Q8IUX8 553 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 NUP37Q8NFH4 326 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 OR1F12Q8NHA8 337 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 CNIH3Q8TBE1 160 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 M1APQ8TC57 530 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 SCFD1Q8WVM8 642 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 TMEM190Q8WZ59 177 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 ST8SIA1Q92185 356 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 C7orf34Q96L11 122 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 TSSK1BQ9BXA7 367 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 UBXN6Q9BZV1 441 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 COMMD4Q9H0A8 199 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 LRRN3Q9H3W5 708 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 EHD1Q9H4M9 534 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 DDX19AQ9NUU7 478 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 SLC2A8Q9NY64 477 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 MRPL39Q9NYK5 338 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 RSPH14Q9UHP6 348 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 CA5BQ9Y2D0 317 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 MRPS28Q9Y2Q9 187 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 MEMO1Q9Y316 297 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 MAD1L1Q9Y6D9 718 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 MYH8P13535 1937 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 NALCNQ8IZF0 1738 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 RIMBP3CA6NJZ7 1639 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 RIMBP3BA6NNM3 1639 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 RIMBP3Q9UFD9 1639 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 DLC1Q96QB1 1528 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 ARHGEF10O15013 1369 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ADCY9O60503 1353 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 A0A1B0GTQ1 180 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ERVV-2B6SEH9 535 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM72CH0Y354 149 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TM9SF1O15321 606 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SORBS2O94875 1100 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 PAHP00439 452 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 RPS15P62841 145 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 NTHL1P78549 312 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SPAG1Q07617 926 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ZSCAN26Q16670 478 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 XKR7Q5GH72 579 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 C6orf226Q5I0X4 101 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 MUC21Q5SSG8 566 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 WLSQ5T9L3 541 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM72AQ5TYM5 149 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 LIPNQ5VXI9 398 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM72DQ6L9T8 149 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ACSM5Q6NUN0 579 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ZNF329Q86UD4 541 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM72BQ86X60 149 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 C10orf67Q8IYJ2 551 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 LINC01561Q8N1V8 128 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 COMMD1Q8N668 190 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SAMD12Q8N8I0 201 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SUMF1Q8NBK3 374 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SPPL2AQ8TCT8 520 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 NABP1Q96AH0 204 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ISG20Q96AZ6 181 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 ZNF501Q96CX3 271 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 DNAJA3Q96EY1 480 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SDSLQ96GA7 329 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 COPS8Q99627 209 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 C19orf43Q9BQ61 176 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 BPIFA3Q9BQP9 254 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SLC30A2Q9BRI3 323 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 STRADBQ9C0K7 418 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 GLT8D2Q9H1C3 349 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 RNF41Q9H4P4 317 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 TMEM185BQ9H7F4 350 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SDF2L1Q9HCN8 221 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ZDHHC18Q9NUE0 388 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 THYN1Q9P016 225 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TMEM181Q9P2C4 612 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 EIF3LQ9Y262 564 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 PEAK1Q9H792 1746 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TMEM131LA2VDJ0 1609 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ABCC6O95255 1503 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 PXDNLA1KZ92 1463 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 PLEKHG2Q9H7P9 1386 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 RNF212BA8MTL3 300 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SUPT3HB4E1H0 165 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 GOLGA6L19H0YKK7 550 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 OR7A17O14581 309 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 POLR3GO15318 223 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 ATP8B1O43520 1251 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SRPX2O60687 465 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 N4BP1O75113 896 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 CRYGBP07316 175 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FCGR3AP08637 254 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 HOXB7P09629 217 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 PGCP20142 388 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 CDKN1BP46527 198 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms