RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 BBS1Q8NFJ9 593 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 OR4C15Q8NGM1 316 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 BOLA1Q9Y3E2 137 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 FFAR1O14842 300 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 RNF13O43567 381 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 TOXO94900 526 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 GSTT2P0CG29 244 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 GSTT2BP0CG30 244 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 SHC1P29353 583 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 MAP3K8P41279 467 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 CASP3P42574 277 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 AP3S2P59780 193 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 GFOD2Q3B7J2 385 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 HES5Q5TA89 166 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 SHISA6Q6ZSJ9 500 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 NUP54Q7Z3B4 507 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 GUCD1Q96NT3 240 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 ADOQ96SZ5 270 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 NEURL2Q9BR09 285 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 TAPBPLQ9BX59 468 aa10.81□□□□□ -0.68
NPHP4-204ENST00000460696 C6orf106Q9H6K1 298 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-204ENST00000460696 SIRT3Q9NTG7 399 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-204ENST00000460696 KIR2DS5A0A0G2JLQ3 304 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 A0A0G2JNG1 304 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 KIR2DS3K7RE56 304 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 PRAMEF2O60811 474 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GP1BBP13224 206 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 FPR3P25089 353 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GRK5P34947 590 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 FAUP35544 74 aaKnown RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SOX18P35713 384 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 ARFIP1P53367 373 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SNTB2Q13425 540 aaKnown RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 KIR2DS5Q14953 304 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 NSDHLQ15738 373 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 CDH24Q86UP0 819 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SERPINA12Q8IW75 414 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SMAP2Q8WU79 429 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 TM9SF4Q92544 642 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 RSC1A1Q92681 617 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 BCL2L10Q9HD36 194 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SLC35A3Q9Y2D2 325 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 A3GALT2U3KPV4 340 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SCN5AQ14524 2016 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 UNC13CQ8NB66 2214 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 A0A1B0GWA3 101 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 OR2W5A6NFC9 320 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 C17orf105B2RV13 164 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 EIF1AYO14602 144 aaKnown RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 CSN2P05814 226 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GIMD1P0DJR0 217 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 PRKCAP17252 672 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 C21orf58P58505 322 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 BTBD16Q32M84 506 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 ZMAT1Q5H9K5 638 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 BCL2L15Q5TBC7 163 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 LAIR2Q6ISS4 152 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 IL17RCQ8NAC3 791 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 COX14Q96I36 57 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GINS4Q9BRT9 223 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 CACNG6Q9BXT2 260 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 LRRN3Q9H3W5 708 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 TAS2R10Q9NYW0 307 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 ASB4Q9Y574 426 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 A0A1W2PPC1 479 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 HTR3EA5X5Y0 456 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 TVP23AA6NH52 213 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 H0YC42 278 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 CDC40O60508 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 RAD1O60671 282 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GCM2O75603 506 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SPARCP09486 303 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 CD3GP09693 182 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 PIPP12273 146 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 ADH7P40394 386 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 OR1D4P47884 311 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 HMGA2P52926 109 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 CTBP2P56545 445 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 PCBP4P57723 403 aaKnown RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 RUNX2Q13950 521 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SFRP4Q6FHJ7 346 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 KRT77Q7Z794 578 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 TMPRSS12Q86WS5 348 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 OR4D11Q8NGI4 311 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GRPEL2Q8TAA5 225 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 FCRL1Q96LA6 429 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 NEDD4LQ96PU5 975 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 PDCD10Q9BUL8 212 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 SLC25A18Q9H1K4 315 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 POT1Q9NUX5 634 aa10.8□□□□□ -0.68
NPHP4-204ENST00000460696 GPR55Q9Y2T6 319 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-204ENST00000460696 ADAM23O75077 832 aa10.79□□□□□ -0.68
NPHP4-204ENST00000460696 AHSA1O95433 338 aa10.79□□□□□ -0.68
NPHP4-204ENST00000460696 NTN1O95631 604 aa10.79□□□□□ -0.68
NPHP4-204ENST00000460696 TGFBR2P37173 567 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms