RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 RNF148Q8N7C7 305 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 BHLHE22Q8NFJ8 381 aaPredicted RBP9.81□□□□□ -0.84
CCDC12-204ENST00000460035 POC1BQ8TC44 478 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 FIG4Q92562 907 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 SLC35B4Q969S0 331 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 ZNF524Q96C55 264 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 NPAS1Q99742 590 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 PINK1Q9BXM7 581 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 TP63Q9H3D4 680 aaPredicted RBP9.81□□□□□ -0.84
CCDC12-204ENST00000460035 ALG2Q9H553 416 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 KLHL28Q9NXS3 571 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 TMEM181Q9P2C4 612 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 PRDM4Q9UKN5 801 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 PACSIN3Q9UKS6 424 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 SLC5A6Q9Y289 635 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 CHST2Q9Y4C5 530 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 AP4B1Q9Y6B7 739 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 HCFC1P51610 2035 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 PTPN13Q12923 2485 aa9.81□□□□□ -0.84
CCDC12-204ENST00000460035 FAAHO00519 579 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 ADAM11O75078 769 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 WDR1O75083 606 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 GMNNO75496 209 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 UBOX5O94941 541 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 NTN1O95631 604 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 T-ENOLP0DO92 83 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 PRG2P13727 222 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 GABRA1P14867 456 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 CPN1P15169 458 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 TCN1P20061 433 aaPredicted RBP9.8□□□□□ -0.84
CCDC12-204ENST00000460035 CCNA2P20248 432 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 PSMA4P25789 261 aaKnown RBP9.8□□□□□ -0.84
CCDC12-204ENST00000460035 ACVR2AP27037 513 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 ADH6P28332 368 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 KDELR2P33947 212 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 LHX2P50458 406 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 SUCLG1P53597 346 aaKnown RBP9.8□□□□□ -0.84
CCDC12-204ENST00000460035 HOXC5Q00444 222 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 SF3B4Q15427 424 aaKnown RBP eCLIP9.8□□□□□ -0.847e-6■□□□□ 9.4
CCDC12-204ENST00000460035 BCL2A1Q16548 175 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 DUSP7Q16829 419 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 GLIPR1L2Q4G1C9 344 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 LRRC23Q53EV4 343 aaPredicted RBP9.8□□□□□ -0.84
CCDC12-204ENST00000460035 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 SLC25A53Q5H9E4 307 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 RINLQ6ZS11 566 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 ULK2Q8IYT8 1036 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 PGAM4Q8N0Y7 254 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 LILRA2Q8N149 483 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 TNIP2Q8NFZ5 429 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 ST8SIA1Q92185 356 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 TAMM41Q96BW9 452 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 MRGPRX4Q96LA9 322 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 TRIB1Q96RU8 372 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 PRDM14Q9GZV8 571 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 TMEM185BQ9H7F4 350 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 SERINC1Q9NRX5 453 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 ACER3Q9NUN7 267 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 MEMO1Q9Y316 297 aa9.8□□□□□ -0.84
CCDC12-204ENST00000460035 CLEC18AA5D8T8 446 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 E9PLN8 166 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 H0YC42 278 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 CXCR6O00574 342 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 EIF1AYO14602 144 aaKnown RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 EFNA2O43921 213 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 SEMA7AO75326 666 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 HOXD4P09016 255 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 NCK1P16333 377 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 ZNF708P17019 499 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 IL11P20809 199 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 ELK4P28324 431 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 SFTPDP35247 375 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 PTGER4P35408 488 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 ACAA2P42765 397 aaKnown RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 SLC1A3P43003 542 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 KCNJ5P48544 419 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 TPD52P55327 224 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 CLDN18P56856 261 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 CLDN20P56880 219 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 RGS8P57771 180 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 RAC1P63000 192 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 PMPCAQ10713 525 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 SGCBQ16585 318 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 TMEM176BQ3YBM2 270 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 SAMD4BQ5PRF9 694 aaKnown RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 PDSS1Q5T2R2 415 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 C1orf185Q5T7R7 199 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 TMEM211Q6ICI0 200 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 CLEC18BQ6UXF7 455 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 RPTNQ6XPR3 784 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 PLEKHM3Q6ZWE6 761 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 GRINAQ7Z429 371 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 CLEC18CQ8NCF0 446 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 FAM156AQ8NDB6 213 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 RBM15BQ8NDT2 890 aaKnown RBP9.79□□□□□ -0.84
CCDC12-204ENST00000460035 OR10Q1Q8NGQ4 319 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 RASSF5Q8WWW0 418 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 PROX1Q92786 737 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 FAM162AQ96A26 154 aa9.79□□□□□ -0.84
CCDC12-204ENST00000460035 TPD52L3Q96J77 140 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms