RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 GPATCH1Q9BRR8 931 aaKnown RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 POTEKPQ9BYX7 375 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 PRRG4Q9BZD6 226 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 CLCF1Q9UBD9 225 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 HTR3EA5X5Y0 456 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 SLC22A20A6NK97 555 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 H3BML4 177 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 ADAMDEC1O15204 470 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 CTSSP25774 331 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 PSMA4P25789 261 aaKnown RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 RGS8P57771 180 aaPredicted RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 SESN3P58005 492 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 MAPK11Q15759 364 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 EMC4Q5J8M3 183 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 ARSKQ6UWY0 536 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 MCEMP1Q8IX19 187 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 PGAM4Q8N0Y7 254 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 OR5M9Q8NGP3 310 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 OR10A6Q8NH74 314 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 CNOT9Q92600 299 aaKnown RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 PROX1Q92786 737 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 SPAG4Q9NPE6 437 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 ALKBH4Q9NXW9 302 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 SLAMF8Q9P0V8 285 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 ZNF629Q9UEG4 869 aaPredicted RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 ZNF337Q9Y3M9 751 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 CLCA1A8K7I4 914 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 RCBTB2O95199 551 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 PSME3P61289 254 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 MFSD13AQ14CX5 517 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 RNPS1Q15287 305 aaKnown RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 SAMD4BQ5PRF9 694 aaKnown RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 PTOV1Q86YD1 416 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 OR6S1Q8NH40 331 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 STK35Q8TDR2 534 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 TRIB1Q96RU8 372 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 NAA11Q9BSU3 229 aaPredicted RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 RTN4RQ9BZR6 473 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 ADPRHL2Q9NX46 363 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 CHRNA9Q9UGM1 479 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 SH3BGRL2Q9UJC5 107 aa9.65□□□□□ -0.86
UBR4-208ENST00000459947 DSPP15924 2871 aaKnown RBP9.65□□□□□ -0.86
UBR4-208ENST00000459947 HOXB6P17509 224 aaKnown RBP9.65□□□□□ -0.87
UBR4-208ENST00000459947 CXCR1P25024 350 aa9.65□□□□□ -0.87
UBR4-208ENST00000459947 HBMQ6B0K9 141 aa9.65□□□□□ -0.87
UBR4-208ENST00000459947 OR10Q1Q8NGQ4 319 aa9.65□□□□□ -0.87
UBR4-208ENST00000459947 LILRB4Q8NHJ6 448 aa9.65□□□□□ -0.87
UBR4-208ENST00000459947 TUBA1CQ9BQE3 449 aa9.65□□□□□ -0.87
UBR4-208ENST00000459947 EIF1BO60739 113 aaKnown RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 GOSR1O95249 250 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 STAMBPO95630 424 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 GYS2P54840 703 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 PDK3Q15120 406 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 C6orf89Q6UWU4 347 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 POC1BQ8TC44 478 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 NSL1Q96IY1 281 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 EPYCQ99645 322 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 KCNJ16Q9NPI9 418 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 ABCD2Q9UBJ2 740 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 RPS6KA6Q9UK32 745 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 TRAPPC4Q9Y296 219 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 EMC9Q9Y3B6 208 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 CHD6Q8TD26 2715 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 AP3D1O14617 1153 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 TMIGD3P0DMS9 266 aaPredicted RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 CALB2P22676 271 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 GZMMP51124 257 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 MXRA7P84157 204 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 CBLN3Q6UW01 205 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 VRK2Q86Y07 508 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 POU5F2Q8N7G0 328 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 CA5BP1Q8WTZ4 195 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 ITLN2Q8WWU7 325 aaPredicted RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 SDCCAG3Q96C92 435 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 ARHGDIGQ99819 225 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 FAM215AQ9Y5M1 114 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 ZGRF1Q86YA3 2104 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 PHF3Q92576 2039 aaKnown RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 OIP5O43482 229 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 MFN2O95140 757 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 PMS2P2O95744 297 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 NUDT7P0C024 238 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 IDH2P48735 452 aaKnown RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 ASCL1P50553 236 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 RAC3P60763 192 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 SLC35A1P78382 337 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 ADRM1Q16186 407 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 RPS26P11Q5JNZ5 115 aaPredicted RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 C8orf82Q6P1X6 216 aaPredicted RBP9.64□□□□□ -0.87
UBR4-208ENST00000459947 TREML1Q86YW5 311 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 TAPBPLQ9BX59 468 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 EMC3Q9P0I2 261 aa9.64□□□□□ -0.87
UBR4-208ENST00000459947 TMED7-TICAM2A0A0A6YYA0 188 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 KCNJ5P48544 419 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 CARD18P57730 90 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 ADORA2A-AS1P86434 159 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 PMPCAQ10713 525 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 BNIP2Q12982 314 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms