RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	GRAMD2A	Q8IUY3	354 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	METTL25	Q8N6Q8	603 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	PCYOX1L	Q8NBM8	494 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	C11orf65	Q8NCR3	313 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	HIPK4	Q8NE63	616 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	OR4D11	Q8NGI4	311 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	ZPLD1	Q8TCW7	415 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	FIG4	Q92562	907 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	MRGPRX4	Q96LA9	322 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	TRIB1	Q96RU8	372 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	PRR14	Q9BWN1	585 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	ACER3	Q9NUN7	267 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	RNF6	Q9Y252	685 aa		9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	USP9Y	O00507	2555 aa	Predicted RBP	9.23	□□□□□ -0.93
MRPL55-223	ENST00000459783	HEATR5A	Q86XA9	2040 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	MYO7B	Q6PIF6	2116 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	MBD3L4	A6NDZ8	208 aa	Predicted RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	MBD3L3	A6NE82	208 aa	Predicted RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	CFAP73	A6NFT4	308 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	MBD3L5	A6NJ08	208 aa	Predicted RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	CD8B2	A6NJW9	211 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	C5orf58	C9J3I9	102 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	FAAH	O00519	579 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	ADAMDEC1	O15204	470 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	GABRA1	P14867	456 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	PGC	P20142	388 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	HTR2A	P28223	471 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	ELK4	P28324	431 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	GRN	P28799	593 aa	Known RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	PRKAR1B	P31321	381 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SFTPD	P35247	375 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SLC6A8	P48029	635 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	IDH2	P48735	452 aa	Known RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SLC7A2	P52569	658 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	RAC1	P63000	192 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	RBBP4	Q09028	425 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	FOXF2	Q12947	444 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	GNA13	Q14344	377 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	DUSP7	Q16829	419 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	TSPYL5	Q86VY4	417 aa	Predicted RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	ADGRG3	Q86Y34	549 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	LACC1	Q8IV20	430 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	PM20D2	Q8IYS1	436 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	LILRA2	Q8N149	483 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SMYD1	Q8NB12	490 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	ST8SIA1	Q92185	356 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SDCCAG3	Q96C92	435 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	REXO5	Q96IC2	774 aa	Known RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	LRRC37B	Q96QE4	947 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	UCN2	Q96RP3	112 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SRXN1	Q9BYN0	137 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	HHATL	Q9HCP6	504 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	CTPS2	Q9NRF8	586 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	GID8	Q9NWU2	228 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	PACSIN3	Q9UKS6	424 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	AP4B1	Q9Y6B7	739 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	DOPEY2	Q9Y3R5	2298 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	PTPN13	Q12923	2485 aa		9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	SPTAN1	Q13813	2472 aa	Known RBP	9.22	□□□□□ -0.93
MRPL55-223	ENST00000459783	TMEM247	A6NEH6	219 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	FAM220BP	B1ANY3	271 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	C19orf84	I3L1E1	186 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	LINC01387	J3KSC0	135 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783		M0QX08	132 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	EIF1AY	O14602	144 aa	Known RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	TNFSF11	O14788	317 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	CXCL13	O43927	109 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	DCTN3	O75935	186 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	AQP8	O94778	261 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	HOXD4	P09016	255 aa	Predicted RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	T-ENOL	P0DO92	83 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	COL8A1	P27658	744 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	ADH6	P28332	368 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	PTGER4	P35408	488 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	GCK	P35557	465 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	EIF1	P41567	113 aa	Known RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	GSK3B	P49841	420 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	PER3	P56645	1201 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	PSME3	P61289	254 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	LIPE	Q05469	1076 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	MERTK	Q12866	999 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	LARS2	Q15031	903 aa	Known RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	NPTX1	Q15818	432 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	RIPPLY2	Q5TAB7	128 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	GKAP1	Q5VSY0	366 aa	Predicted RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	CCDC80	Q76M96	950 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	RBM45	Q8IUH3	476 aa	Known RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	ZNF808	Q8N4W9	903 aa	Predicted RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	RELL2	Q8NC24	303 aa	Predicted RBP	9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	CCDC197	Q8NCU1	140 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	ATP6V1C2	Q8NEY4	427 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	OR10D3	Q8NH80	312 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	FNDC9	Q8TBE3	224 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	RND1	Q92730	232 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	CMTM5	Q96DZ9	223 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	DTNBP1	Q96EV8	351 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	DNAJA3	Q96EY1	480 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	ARL5B	Q96KC2	179 aa		9.21	□□□□□ -0.94
MRPL55-223	ENST00000459783	KLHL15	Q96M94	604 aa		9.21	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms