RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 A6NL46 340 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 RIIAD1A6NNX1 92 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 A8MVM7 634 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 LINC01387J3KSC0 135 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 KPNA4O00629 521 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 GNB5O14775 395 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 FRS3O43559 492 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 NOL3O60936 208 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 TRIM3O75382 744 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 TRAPPC6AO75865 159 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 AHSA1O95433 338 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 SNAP29O95721 258 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 MT-ATP6P00846 226 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 GASTP01350 101 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 IGKV1D-16P01601 117 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CLPSP04118 112 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 NR2C1P13056 603 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 LIFP15018 202 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CCNA2P20248 432 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CNR1P21554 472 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 TACR3P29371 465 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC6A6P31641 620 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CASP3P42574 277 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 GUCA1AP43080 201 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CLK1P49759 484 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CCL11P51671 97 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 IST1P53990 364 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 DSCR4P56555 118 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 HOXC5Q00444 222 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 PRKCDQ05655 676 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 LGALS3BPQ08380 585 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 KCNAB2Q13303 367 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 KEAP1Q14145 624 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 QPRTQ15274 297 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 MAPK14Q16539 360 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC36A3Q495N2 470 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZBED5Q49AG3 693 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 RBM48Q5RL73 367 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 MEDAGQ5VYS4 303 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 C1orf94Q6P1W5 598 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 OLIG3Q7RTU3 272 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 HDDC2Q7Z4H3 204 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 PLCZ1Q86YW0 608 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 NRMQ8IXM6 262 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF786Q8N393 782 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 PARP8Q8N3A8 854 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF441Q8N8Z8 693 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR2T33Q8NG76 320 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR14L1PQ8NHC6 308 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC7A13Q8TCU3 470 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 BRIX1Q8TDN6 353 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 APOBEC4Q8WW27 367 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 TRUB1Q8WWH5 349 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 TFAP2CQ92754 450 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 MYDGFQ969H8 173 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 OTULINQ96BN8 352 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZBTB8AQ96BR9 441 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 MRGPRX4Q96LA9 322 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF570Q96NI8 536 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC29A1Q99808 456 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 FAM173AQ9BQD7 235 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ARHGAP9Q9BRR9 750 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 NAA11Q9BSU3 229 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 IFT27Q9BW83 186 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ANKRD60Q9BZ19 345 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 DSN1Q9H410 356 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 CCDC86Q9H6F5 360 aaKnown RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 NTN4Q9HB63 628 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 GPR83Q9NYM4 423 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ACAD8Q9UKU7 415 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF337Q9Y3M9 751 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 MPDZO75970 2070 aa5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 COL27A1Q8IZC6 1860 aaPredicted RBP5.34□□□□□ -1.55
RNU1-88P-201ENST00000459274 DOCK10Q96BY6 2186 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 A0A087WUU8 490 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 A0A087WXM4 84 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMED7-TICAM2A0A0A6YYA0 188 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 A0A0B4J2E0 115 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 TRBV4-1A0A0J9YWV2 114 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 A0A1B0GX12 115 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 A0A1W2PRG6 482 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 CLDN24A6NM45 220 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 NPIPB9F8W1W9 429 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 BLOC1S5-TXNDC5H3BN57 136 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 MKRN2OSH3BPM6 223 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 XKRYO14609 159 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC16A6O15403 523 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 TLX3O43711 291 aaPredicted RBP5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 IDH3BO43837 385 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRKNO60260 465 aaPredicted RBP5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 FADS1O60427 444 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 MAN1A2O60476 641 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 FAM20BO75063 409 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR6B1O95007 311 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 NDUFB2O95178 105 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 CAPNS1P04632 268 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 HK1P19367 917 aa5.33□□□□□ -1.56
RNU1-88P-201ENST00000459274 FUT1P19526 365 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms