RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 DEPDC7Q96QD5 511 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 NRSN2Q9GZP1 204 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 UBQLN3Q9H347 655 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 CPNE5Q9HCH3 593 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 SH2D2AQ9NP31 389 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 CLN6Q9NWW5 311 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 GPN3Q9UHW5 284 aaPredicted RBP6.85□□□□□ -1.31
ERCC3-204ENST00000456257 FARSAQ9Y285 508 aaKnown RBP6.85□□□□□ -1.31
ERCC3-204ENST00000456257 MED31Q9Y3C7 131 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 CEPT1Q9Y6K0 416 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 CDH10Q9Y6N8 788 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 VCANP13611 3396 aa6.85□□□□□ -1.31
ERCC3-204ENST00000456257 WDR87Q6ZQQ6 2873 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 EP300Q09472 2414 aaPredicted RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 IGHV3-20A0A0C4DH32 117 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 ANKRD33BA6NCL7 494 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 EFCAB10A6NFE3 127 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 UNC119BA6NIH7 251 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 EIF4E1BA6NMX2 242 aaKnown RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 GTPBP1O00178 669 aaKnown RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 BHLHE40O14503 412 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 IDH3BO43837 385 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 XPNPEP2O43895 674 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SEC24DO94855 1032 aaPredicted RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 CDK1P06493 297 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 APEHP13798 732 aaKnown RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 MST1P26927 711 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 MSX1P28360 303 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 GRK5P34947 590 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 KRT20P35900 424 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PTGDSP41222 190 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SLC9A3P48764 834 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PCYT1AP49585 367 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 P2RX1P51575 399 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 FOXL2P58012 376 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 FOXK2Q01167 660 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 MVKQ03426 396 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 EMX1Q04741 257 aaPredicted RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 C17orf67Q0P5P2 114 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PMS2P3Q13401 168 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 TMED1Q13445 227 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 NNATQ16517 81 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SMN1Q16637 294 aaKnown RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 TMEM44Q2T9K0 475 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 ALG10BQ5I7T1 473 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 AADACL4Q5VUY2 407 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 FAAH2Q6GMR7 532 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 DESI1Q6ICB0 168 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SLC27A4Q6P1M0 643 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 C19orf48Q6RUI8 117 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 CBLN3Q6UW01 205 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SHISA6Q6ZSJ9 500 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PTCHD4Q6ZW05 846 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 KCTD8Q6ZWB6 473 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PPP1R32Q7Z5V6 425 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 TMPRSS12Q86WS5 348 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 CDK20Q8IZL9 346 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 BPIFB6Q8NFQ5 453 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 OR13F1Q8NGS4 319 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 ZNF420Q8TAQ5 688 aaPredicted RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 FAM81AQ8TBF8 368 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 TMEM163Q8TC26 289 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SGCDQ92629 289 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 BPIFA2Q96DR5 249 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 DDOQ99489 341 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PLA2G12AQ9BZM1 189 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 ENKD1Q9H0I2 346 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 FN3KQ9H479 309 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 SYNDIG1Q9H7V2 258 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 POLR1BQ9H9Y6 1135 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 KRCC1Q9NPI7 259 aaPredicted RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 CTPS2Q9NRF8 586 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 C20orf141Q9NUB4 165 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 ERVK-18Q9QC07 812 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 BAIAP2Q9UQB8 552 aa6.84□□□□□ -1.31
ERCC3-204ENST00000456257 PTRH2Q9Y3E5 179 aaKnown RBP6.84□□□□□ -1.31
ERCC3-204ENST00000456257 TRBV11-1A0A0K0K1C0 115 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 CDRT15L2A8MXV6 281 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 KDM4EB2RXH2 506 aaPredicted RBP6.83□□□□□ -1.32
ERCC3-204ENST00000456257 PTGES3LE9PB15 166 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 H3BSA7 217 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 ARPC3O15145 178 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 SURF4O15260 269 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 NDUFB5O43674 189 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 PRKYO43930 277 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 CDC40O60508 579 aaKnown RBP eCLIP6.83□□□□□ -1.32
ERCC3-204ENST00000456257 HCN1O60741 890 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 HPP00738 406 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 PEPDP12955 493 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 ATP6V1B1P15313 513 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 HPGDP15428 266 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 PGCP20142 388 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 CD82P27701 267 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 DCKP27707 260 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 IL12BP29460 328 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 FMO3P31513 532 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 EVI2BP34910 448 aa6.83□□□□□ -1.32
ERCC3-204ENST00000456257 IDH2P48735 452 aaKnown RBP6.83□□□□□ -1.32
ERCC3-204ENST00000456257 MLF1P58340 268 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms