RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 FAM98BQ52LJ0 330 aaKnown RBP4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 LRRC23Q53EV4 343 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 COQ5Q5HYK3 327 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 PAGE3Q5JUK9 113 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 SPANXN4Q5MJ08 99 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 MANEAQ5SRI9 462 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 CCNYL2Q5T2Q4 361 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 PRAMEF8Q5VWM4 474 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 REP15Q6BDI9 236 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 FRMPD2BQ6IN97 320 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 FAM71E1Q6IPT2 247 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 TCEAL6Q6IPX3 200 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 GUSBP11Q6P575 273 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 C16orf87Q6PH81 154 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 WDR74Q6RFH5 385 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 KIRREL2Q6UWL6 708 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 NHLRC1Q6VVB1 395 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 HACD2Q6Y1H2 254 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 DBX2Q6ZNG2 339 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 QSOX2Q6ZRP7 698 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 FAM92BQ6ZTR7 304 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 PAGE2Q7Z2X7 111 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 DGLUCYQ7Z3D6 616 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 SPRED1Q7Z699 444 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 ASPGQ86U10 573 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 ZNF595Q8IYB9 648 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 DEFB107AQ8IZN7 70 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 CADM3Q8N126 398 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 CARFQ8N187 725 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 TMEM132CQ8N3T6 1108 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 AMER3Q8N944 861 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 ACOT4Q8N9L9 421 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 SUMF1Q8NBK3 374 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 OR2L5Q8NG80 312 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 OR7A2PQ8NGA2 310 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 NSMAFQ92636 917 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 KAT2AQ92830 837 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 TCEAL3Q969E4 200 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 SLAMF9Q96A28 289 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 RERGQ96A58 199 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 TESCQ96BS2 214 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 TM4SF18Q96CE8 201 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 COQ8BQ96D53 544 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 SMIM10Q96HG1 83 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 ZNF285Q96NJ3 590 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 MS4A10Q96PG2 267 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 C17orf62Q9BQA9 187 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 CENPKQ9BS16 269 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 TBCDQ9BTW9 1192 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 THTPAQ9BU02 230 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 GPN1Q9HCN4 374 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 MYNNQ9NPC7 610 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 GID8Q9NWU2 228 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 ATP6V1HQ9UI12 483 aa4.78□□□□□ -1.64
HMGB1P4-201ENST00000455362 AHCTF1Q8WYP5 2266 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 NINQ8N4C6 2090 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 CCDC88CQ9P219 2028 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 A0A0A6YYD5 115 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 A0A0G2JN53 185 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 A0A0G2JPF8 293 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRSS51A0A1B0GVH4 220 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 C2orf92A0A1B0GVN3 265 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZNF503-AS2A6NEH8 195 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 HNRNPCL3B7ZW38 293 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 FAM157AC9JC47 383 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TRIM77I1YAP6 450 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TXNDC9O14530 226 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SCAMP2O15127 329 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 CASC3O15234 703 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ERI3O43414 337 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 DUX1O43812 170 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TBX19O60806 448 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SCN2BO60939 215 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SCAF4O95104 1147 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SCELO95171 688 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZBTB11O95625 1053 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 NPPAP01160 153 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ELANEP08246 267 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 IL3P08700 152 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 RFPL3SP0C7P2 107 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SLC35G6P0C7Q6 338 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZNF806P0C7X5 589 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 HNRNPCL4P0DMR1 293 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 LAMP1P11279 417 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 HIST1H1TP22492 207 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 HPCAL1P37235 193 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 RPS19P39019 145 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 SSR2P43308 183 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TSFMP43897 325 aaKnown RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 GABRA4P48169 554 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 TRPC1P48995 793 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 MAPK12P53778 367 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 VSX2P58304 361 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 RAB8AP61006 207 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PSME3P61289 254 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 BTN3A2P78410 334 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 CCL7P80098 99 aa4.77□□□□□ -1.65
HMGB1P4-201ENST00000455362 PPP2R2BQ00005 443 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms