RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RBBP4Q09028 425 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 EPS8Q12929 822 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PLXDC2Q6UX71 529 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PLEKHM3Q6ZWE6 761 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 VRK2Q86Y07 508 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 OR10Q1Q8NGQ4 319 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 OR10D3Q8NH80 312 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 NFKBIDQ8NI38 313 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 TMEM234Q8WY98 164 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 FIG4Q92562 907 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF845Q96IR2 970 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SPATA9Q9BWV2 254 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 TRIM8Q9BZR9 551 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 ENKD1Q9H0I2 346 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 MYLK2Q9H1R3 596 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 RNF122Q9H9V4 155 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 CHST11Q9NPF2 352 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 JKAMPQ9P055 326 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PRDM4Q9UKN5 801 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 IFT52Q9Y366 437 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 NKX2-6A6NCS4 301 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 SLC22A20A6NK97 555 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
HDAC4-205ENST00000454542 AP3D1O14617 1153 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 MRASO14807 208 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 TNFSF13O75888 250 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 NPPAP01160 153 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 CRHP06850 196 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 TMIGD3P0DMS9 266 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-205ENST00000454542 IL7RP16871 459 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 ME2P23368 584 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 CTSSP25774 331 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 PRKAR1BP31321 381 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 GZMMP51124 257 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 GYS2P54840 703 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 SCARB2Q14108 478 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 REEP3Q6NUK4 255 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 GRINAQ7Z429 371 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 SERPINA11Q86U17 422 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF440Q8IYI8 595 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 SLC39A3Q9BRY0 314 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 PINK1Q9BXM7 581 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 UCK2Q9BZX2 261 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 ARMCX1Q9P291 453 aa12.72□□□□□ -0.37
HDAC4-205ENST00000454542 GJE1A6NN92 205 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 C5orf58C9J3I9 102 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 DVL2O14641 736 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 TNFSF11O14788 317 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 CCDC22O60826 627 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 CYP7B1O75881 506 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 FCGR2AP12318 317 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 OPRM1P35372 400 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 ACAA2P42765 397 aaKnown RBP12.71□□□□□ -0.37
HDAC4-205ENST00000454542 ASCL1P50553 236 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 GNGT1P63211 74 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 FOXF2Q12947 444 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 CAPRIN1Q14444 709 aaKnown RBP12.71□□□□□ -0.37
HDAC4-205ENST00000454542 LARS2Q15031 903 aaKnown RBP12.71□□□□□ -0.37
HDAC4-205ENST00000454542 PON3Q15166 354 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF787Q6DD87 383 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 OR2A2Q6IF42 318 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 DHRS4L2Q6PKH6 230 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 CALHM3Q86XJ0 350 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 TREML1Q86YW5 311 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 LILRA2Q8N149 483 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 FNDC9Q8TBE3 224 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 SLC25A43Q8WUT9 341 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-205ENST00000454542 LRRC58Q96CX6 371 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 SPOCK3Q9BQ16 436 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 ELAC2Q9BQ52 826 aaKnown RBP12.71□□□□□ -0.37
HDAC4-205ENST00000454542 KCNJ16Q9NPI9 418 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 RLIMQ9NVW2 624 aa12.71□□□□□ -0.37
HDAC4-205ENST00000454542 A0A1W2PNV4 684 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 GMNCA6NCL1 334 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 CFAP73A6NFT4 308 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 CYSRT1A8MQ03 144 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 CXCL13O43927 109 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 AQP8O94778 261 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 BMP5P22003 454 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 PCGF2P35227 344 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 SFTPDP35247 375 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 APOBEC1P41238 236 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms