RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 GABREP78334 506 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 NXNL2Q5VZ03 156 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 TSEN54Q7Z6J9 526 aaKnown RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 OR52R1Q8NGF1 315 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 OR9Q1Q8NGQ5 310 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 NFKBIDQ8NI38 313 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 ZFAND1Q8TCF1 268 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 XAGE5Q8WWM1 108 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 GEMIN6Q8WXD5 167 aaKnown RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 SLC9A6Q92581 669 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 RAB8BQ92930 207 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 MAL2Q969L2 176 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 GIMAP5Q96F15 307 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 C16orf58Q96GQ5 468 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 ZC3HAV1LQ96H79 300 aaKnown RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 OR7D2Q96RA2 312 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 COPS7AQ9UBW8 275 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 PRODH2Q9UF12 536 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 LSM2Q9Y333 95 aaKnown RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 PTRH2Q9Y3E5 179 aaKnown RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 ZNF451Q9Y4E5 1061 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 PTPRBP23467 1997 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 TMEM229AB2RXF0 380 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 CTDSP2O14595 271 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 PCDH17O14917 1159 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 ARHGEF9O43307 516 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SLC28A2O43868 658 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 GPX5O75715 221 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 PDE9AO76083 593 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 CBX7O95931 251 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 IGHEP01854 428 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 NR2F1P10589 423 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 FOLR3P41439 243 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 IDH2P48735 452 aaKnown RBP14.63□□□□□ -0.07
SNX17-204ENST00000453453 CRYBA2P53672 197 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 GALK2Q01415 458 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 FUT7Q11130 342 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SSX1Q16384 188 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 REEP3Q6NUK4 255 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 HSDL2Q6YN16 418 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 ZNF767PQ75MW2 155 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 C16orf62Q7Z3J2 963 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 ANKRD37Q7Z713 158 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 OR5D16Q8NGK9 328 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 PTPMT1Q8WUK0 201 aaPredicted RBP14.63□□□□□ -0.07
SNX17-204ENST00000453453 OPALINQ96PE5 141 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SERHL2Q9H4I8 314 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 AKIRIN1Q9H9L7 192 aaPredicted RBP14.63□□□□□ -0.07
SNX17-204ENST00000453453 SLC25A19Q9HC21 320 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 ERVK13-1Q9NX77 482 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 FOXJ2Q9P0K8 574 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 LIPT1Q9Y234 373 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 HCN1O60741 890 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 BCHEP06276 602 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 RAB40ALP0C0E4 278 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 M6PRP20645 277 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 S1PR1P21453 382 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 CD82P27701 267 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SSTR4P31391 388 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SPIBQ01892 262 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 ZNF79Q15937 498 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 RSPO4Q2I0M5 234 aaPredicted RBP14.63□□□□□ -0.07
SNX17-204ENST00000453453 GLYR1Q49A26 553 aaPredicted RBP14.63□□□□□ -0.07
SNX17-204ENST00000453453 FAM209AQ5JX71 171 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 LANCL3Q6ZV70 420 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 TMPRSS7Q7RTY8 843 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 MORN4Q8NDC4 146 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SPPL2AQ8TCT8 520 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SLC2A12Q8TD20 617 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 MARVELD3Q96A59 401 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 SENP5Q96HI0 755 aaPredicted RBP14.63□□□□□ -0.07
SNX17-204ENST00000453453 STACQ99469 402 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 MED18Q9BUE0 208 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 MND1Q9BWT6 205 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 OR8D2Q9GZM6 311 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 OR10A5Q9H207 317 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 RNF167Q9H6Y7 350 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 FOLH1BQ9HBA9 442 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 HHATLQ9HCP6 504 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 C14orf119Q9NWQ9 140 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 NDUFB11Q9NX14 153 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 CALML5Q9NZT1 146 aa14.63□□□□□ -0.07
SNX17-204ENST00000453453 KNTC1P50748 2209 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 STMND1H3BQB6 276 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 SSX4O60224 188 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 HLA-DQB1P01920 261 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 TCN2P20062 427 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 PSMA1P25786 263 aaKnown RBP14.62□□□□□ -0.07
SNX17-204ENST00000453453 SOX18P35713 384 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 MAN2A2P49641 1150 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 EFNA3P52797 238 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 NUDT6P53370 316 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 CRISP3P54108 245 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 RPS15P62841 145 aaKnown RBP14.62□□□□□ -0.07
SNX17-204ENST00000453453 MLLT11Q13015 90 aaPredicted RBP14.62□□□□□ -0.07
SNX17-204ENST00000453453 MED22Q15528 200 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 EXOC3L2Q2M3D2 409 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 SIGIRRQ6IA17 410 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 COX18Q8N8Q8 333 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 NLGN4YQ8NFZ3 816 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms