RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TXNL4BQ9NX01 149 aaKnown RBP10.84□□□□□ -0.67
VTA1-203ENST00000452973 MKL2Q9ULH7 1088 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 CACNA1EQ15878 2313 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 FAM86C2PA6NEL3 165 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 SERINC4A6NH21 518 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 C12orf71A8MTZ7 269 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 FMO6PO60774 539 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 GLB1P16278 677 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 SERTAD2Q14140 314 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 FGFBP1Q14512 234 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 ARHGAP40Q5TG30 622 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 KLBQ86Z14 1044 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 SDR16C5Q8N3Y7 309 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 C10orf53Q8N6V4 93 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 OR10H4Q8NGA5 316 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 BRIX1Q8TDN6 353 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 ADAMTS18Q8TE60 1221 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 SPRYD4Q8WW59 207 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 HDHD5Q9BXW7 423 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 BARHL1Q9BZE3 327 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 ISG20L2Q9H9L3 353 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 FGF20Q9NP95 211 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 FGF21Q9NSA1 209 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 FAIMQ9NVQ4 179 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 C17orf51A8MQB3 221 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 PRR23D1E9PI22 279 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 PRR23D2P0DMB1 279 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 HTR1FP30939 366 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 PPP5CP53041 499 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 LIMK1P53667 647 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 CAV3P56539 151 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 CRMP1Q14194 572 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 CD226Q15762 336 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 ULK3Q6PHR2 472 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 CBLN3Q6UW01 205 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 SLC37A3Q8NCC5 494 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 FAM83FQ8NEG4 500 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 DNASE2BQ8WZ79 361 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 ZNF304Q9HCX3 659 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 GMEB2Q9UKD1 530 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 EXOSC1Q9Y3B2 195 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 GTPBP1O00178 669 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 HCN1O60741 890 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 PDGFBP01127 241 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 CPEP16870 476 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 FBLP22087 321 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 CD40LGP29965 261 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 ARRB1P49407 418 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 EFNA3P52797 238 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 EPHA4P54764 986 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.83□□□□□ -0.68
VTA1-203ENST00000452973 DSG2Q14126 1118 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 TMPRSS11FQ6ZWK6 438 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 ZNF550Q7Z398 422 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 PSD4Q8NDX1 1056 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 OR4K13Q8NH42 304 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 HOXB13Q92826 284 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 UFD1Q92890 307 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 PTP4A1Q93096 173 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 TP53INP1Q96A56 240 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 CCDC74AQ96AQ1 378 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 ERMAPQ96PL5 475 aaPredicted RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 ERVK13-1Q9NX77 482 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
VTA1-203ENST00000452973 PRODH2Q9UF12 536 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 SERTAD3Q9UJW9 196 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 B3GNT3Q9Y2A9 372 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 TMEM5Q9Y2B1 443 aa10.83□□□□□ -0.68
VTA1-203ENST00000452973 IRGMA1A4Y4 181 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 FITM1A5D6W6 292 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 RIIAD1A6NNX1 92 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 OIP5O43482 229 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 DYRK3O43781 588 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 GIMD1P0DJR0 217 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 SLC37A1P57057 533 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 ZNF141Q15928 474 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 SPANXN2Q5MJ10 180 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 LNX2Q8N448 690 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 TMEM99Q8N816 258 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 SLC2A12Q8TD20 617 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 PMM1Q92871 262 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 ELF4Q99607 663 aaPredicted RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 SMAD5Q99717 465 aaKnown RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 MED17Q9NVC6 651 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 ZNF229Q9UJW7 825 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 ADAM18Q9Y3Q7 739 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 IGHV3-20A0A0C4DH32 117 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 TMEM129A0AVI4 362 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 SLC35F4A4IF30 521 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 CLPSP04118 112 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 SDC2P34741 201 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 RUNX1T1Q06455 604 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 NIPAL3Q6P499 406 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 APOOLQ6UXV4 268 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 MEPCEQ7L2J0 689 aaKnown RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 SLC22A16Q86VW1 577 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms