RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CHP1Q99653 195 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 DOK1Q99704 481 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 SLC30A2Q9BRI3 323 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 RSRP1Q9BUV0 290 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF416Q9BWM5 594 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 KRTAP9-9Q9BYP9 154 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 RTN4RQ9BZR6 473 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 ANKZF1Q9H8Y5 726 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 TCF7L1Q9HCS4 588 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 SLC17A5Q9NRA2 495 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 MED17Q9NVC6 651 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
LINC01961-201ENST00000449954 EMC3Q9P0I2 261 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 SLAMF8Q9P0V8 285 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 MRTO4Q9UKD2 239 aaKnown RBP6.77□□□□□ -1.33
LINC01961-201ENST00000449954 TSC22D4Q9Y3Q8 395 aa6.77□□□□□ -1.33
LINC01961-201ENST00000449954 PCNX3Q9H6A9 2034 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 TCRBV7S2A1N4TA0A589 114 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 C1orf226A1L170 272 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 NCF1BA6NI72 391 aaPredicted RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 NCF1CA8MVU1 366 aaPredicted RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 C3orf84H3BNL1 204 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CCDC188H7C350 402 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 WNT9BO14905 357 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 PIP5K1BO14986 540 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 PPIHO43447 177 aaKnown RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 GMFGO60234 142 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CYTIPO60759 359 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ULK1O75385 1050 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ERLIN1O75477 346 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CLPXO76031 633 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 TTC4O95801 387 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ZSCAN5DPP0CG00 497 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 NCF1P14598 390 aaPredicted RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 NPR2P20594 1047 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ENPP1P22413 925 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 GP5P40197 560 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 MAGEA1P43355 309 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 VPS41P49754 854 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ATP4BP51164 291 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 UBASH3AP57075 661 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 RAC3P60763 192 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 PRPS1P60891 318 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 MRPS35P82673 323 aaKnown RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 SLC25A3Q00325 362 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 TSNQ15631 228 aaKnown RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 MLANAQ16655 118 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 DECR1Q16698 335 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 KLHL22Q53GT1 634 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ELFN2Q5R3F8 820 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 GRHL2Q6ISB3 625 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CCBE1Q6UXH8 406 aaPredicted RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CARM1Q86X55 608 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CREG2Q8IUH2 290 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ZCCHC24Q8N2G6 241 aaKnown RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 WDR31Q8NA23 367 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ZFP90Q8TF47 636 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 APH1AQ96BI3 265 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 SLC38A2Q96QD8 506 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF300Q96RE9 604 aaPredicted RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 MTERF1Q99551 399 aaKnown RBP6.76□□□□□ -1.33
LINC01961-201ENST00000449954 COQ10BQ9H8M1 238 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 OBP2BQ9NPH6 170 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ABHD10Q9NUJ1 306 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 OXSMQ9NWU1 459 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 FAM53CQ9NYF3 392 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 TAS2R9Q9NYW1 312 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 CTNNAL1Q9UBT7 734 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 ZNF69Q9UC07 566 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 PSME2Q9UL46 239 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 HERC2O95714 4834 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 PLXNB1O43157 2135 aa6.76□□□□□ -1.33
LINC01961-201ENST00000449954 PPIAL4EA0A075B759 164 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 PPIAL4CA0A0B4J2A2 164 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 CCDC151A5D8V7 595 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 MIF4GDA9UHW6 222 aaKnown RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 PPIAL4DF5H284 164 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 TAPBPO15533 448 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 GUCY1B2O75343 617 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 ERAL1O75616 437 aaKnown RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 SEMA3DO95025 777 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 IGHV3-9P01782 118 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 ITGA5P08648 1049 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 PPIAL4FP0DN26 164 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 MLNP12872 115 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 EPORP19235 508 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 GABRB3P28472 473 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 SHC1P29353 583 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 GDNFP39905 211 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 HSPA7P48741 367 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 KRTAP10-3P60369 221 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 RPL15P61313 204 aaKnown RBP6.75□□□□□ -1.33
LINC01961-201ENST00000449954 LTB4RQ15722 352 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 SULT1C3Q6IMI6 304 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 LRRC70Q7Z2Q7 622 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 SPATA21Q7Z572 469 aa6.75□□□□□ -1.33
LINC01961-201ENST00000449954 CNTN4Q8IWV2 1026 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms