RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 DENND2DQ9H6A0 471 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-207ENST00000447641 KAT8Q9H7Z6 458 aaKnown RBP12.77□□□□□ -0.37
SREBF1-207ENST00000447641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-207ENST00000447641 MED17Q9NVC6 651 aa12.77□□□□□ -0.37
SREBF1-207ENST00000447641 SLC35A3Q9Y2D2 325 aa12.77□□□□□ -0.37
SREBF1-207ENST00000447641 RPH3AQ9Y2J0 694 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-207ENST00000447641 FAM215AQ9Y5M1 114 aa12.77□□□□□ -0.37
SREBF1-207ENST00000447641 OR2M5A3KFT3 312 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 TMEM247A6NEH6 219 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 FIGNL2A6NMB9 653 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PGM3O95394 542 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 CSTAP01040 98 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 BCHEP06276 602 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 NID1P14543 1247 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 GABRA1P14867 456 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF708P17019 499 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF17P17021 662 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PTGER4P35408 488 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 RNF144AP50876 292 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 GZMMP51124 257 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 DLX5P56178 289 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PER3P56645 1201 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 CLDN18P56856 261 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 HPCAP84074 193 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ADORA2A-AS1P86434 159 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 LIPEQ05469 1076 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 SELPLGQ14242 412 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 CAPRIN1Q14444 709 aaKnown RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 KPNB1Q14974 876 aaKnown RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 SNCBQ16143 134 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 SLC25A53Q5H9E4 307 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 GCNT6Q5T4J0 391 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ADGRE4PQ86SQ3 457 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PTOV1Q86YD1 416 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 MCEMP1Q8IX19 187 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PM20D2Q8IYS1 436 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 OR2T12Q8NG77 320 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 POC1BQ8TC44 478 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ZPLD1Q8TCW7 415 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ZBTB8AQ96BR9 441 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 SFXN2Q96NB2 322 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 UCN2Q96RP3 112 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PIGQQ9BRB3 760 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 TRIM8Q9BZR9 551 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 EXOSC3Q9NQT5 275 aaKnown RBP12.76□□□□□ -0.37
SREBF1-207ENST00000447641 CD300AQ9UGN4 299 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 SH3BGRL2Q9UJC5 107 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF337Q9Y3M9 751 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 SNX13Q9Y5W8 968 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 VPS13CQ709C8 3753 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 PKDREJQ9NTG1 2253 aa12.76□□□□□ -0.37
SREBF1-207ENST00000447641 AQP12BA6NM10 295 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CLDN24A6NM45 220 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 FAM220BPB1ANY3 271 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 GMFGO60234 142 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 EPPINO95925 133 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 THBS1P07996 1170 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ETS2P15036 469 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ADH6P28332 368 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 GCKP35557 465 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 STARP49675 285 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CLDN15P56746 228 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 MTPNP58546 118 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CDK6Q00534 326 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CEACAM7Q14002 265 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ITPR3Q14573 2671 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 TOMM34Q15785 309 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CYP51A1Q16850 503 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 TMEM211Q6ICI0 200 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 REEP3Q6NUK4 255 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ENPP6Q6UWR7 440 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 AQP12AQ8IXF9 295 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 PEX5LQ8IYB4 626 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 EID3Q8N140 333 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 RPRMLQ8N4K4 120 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF614Q8N883 585 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 REXO5Q96IC2 774 aaKnown RBP12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CLPTM1LQ96KA5 538 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 SLC39A3Q9BRY0 314 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 TTYH2Q9BSA4 534 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 ACTR3BQ9P1U1 418 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 PRDM4Q9UKN5 801 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CHST2Q9Y4C5 530 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
SREBF1-207ENST00000447641 CCDC168Q8NDH2 2452 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 KIAA1549Q9HCM3 1950 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ELOVL7A1L3X0 281 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 CDHR4A6H8M9 788 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 PRORSD1PA6NEY8 169 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 NME4O00746 187 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 EFNA2O43921 213 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ADAM11O75078 769 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ATP6V1G2O95670 118 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 UBTFL6P0CB48 400 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms