RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MARCH7Q9H992 704 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 MSL2Q9HCI7 577 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 PALMDQ9NP74 551 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 MS4A12Q9NXJ0 267 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 UVRAGQ9P2Y5 699 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 SEC14L4Q9UDX3 406 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 DHRS7Q9Y394 339 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 AUP1Q9Y679 476 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 DNAH10Q8IVF4 4471 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 IGLV3-32A0A0A0MS00 114 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 LGALS16A8MUM7 142 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 H7C0C1 242 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 APOC4-APOC2K7ER74 178 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 PDLIM1O00151 329 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 RTCAO00442 366 aaKnown RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 APOC2P02655 101 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 ADRA2AP08913 450 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 IGHV4-38-2P0DP08 117 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 NAT1P18440 290 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 MSX2P35548 267 aaPredicted RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 PPICP45877 212 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 ATP5OP48047 213 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 RAB10P61026 200 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 TGM3Q08188 693 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 KLHL30Q0D2K2 578 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 SLMAPQ14BN4 828 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 HERPUD1Q15011 391 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 DEFB112Q30KQ8 113 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 FBXW9Q5XUX1 488 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 TMEM200BQ69YZ2 307 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 BBS12Q6ZW61 710 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 FCRLAQ7L513 359 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 RNF144BQ7Z419 303 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 LINC00523Q86TU6 105 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 GTPBP8Q8N3Z3 284 aaPredicted RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 C17orf78Q8N4C9 275 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 NUP37Q8NFH4 326 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 CCT6BQ92526 530 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 TMBIM1Q969X1 311 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 CPNE4Q96A23 557 aaPredicted RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 FBXL8Q96CD0 374 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 SLC47A1Q96FL8 570 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 F2RL3Q96RI0 385 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 KATNB1Q9BVA0 655 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 ZNF416Q9BWM5 594 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 PTGES2Q9H7Z7 377 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 SLC17A5Q9NRA2 495 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 MMP26Q9NRE1 261 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 CHRAC1Q9NRG0 131 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 SIRT3Q9NTG7 399 aaPredicted RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 DDX56Q9NY93 547 aaKnown RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 LEF1Q9UJU2 399 aaPredicted RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 PURGQ9UJV8 347 aaKnown RBP2.75□□□□□ -1.97
PMS1-215ENST00000447232 AMDHD2Q9Y303 409 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 POMT1Q9Y6A1 747 aa2.75□□□□□ -1.97
PMS1-215ENST00000447232 IGHV1-18A0A0C4DH31 117 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 CIB4A0PJX0 185 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 C1orf226A1L170 272 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 E9PQ18 207 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 PIP5K1BO14986 540 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 MGRN1O60291 552 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 FADS1O60427 444 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 NCR1O76036 304 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 IL33O95760 270 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 GUCA1CO95843 209 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 OPN1LWP04000 364 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 ITGA5P08648 1049 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 C1GALT1C1LP0DN25 315 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 PPIAL4GP0DN37 164 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 SKILP12757 684 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 IGLL1P15814 213 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 ZNF12P17014 697 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 NPR2P20594 1047 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 ENPP1P22413 925 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 SHC1P29353 583 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 TIA1P31483 386 aaKnown RBP eCLIP2.74□□□□□ -1.97
PMS1-215ENST00000447232 EVI2BP34910 448 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 GRIA1P42261 906 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 MAGEA1P43355 309 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 MANFP55145 182 aaKnown RBP2.74□□□□□ -1.97
PMS1-215ENST00000447232 NAP1L1P55209 391 aaKnown RBP2.74□□□□□ -1.97
PMS1-215ENST00000447232 FOXG1P55316 489 aaPredicted RBP2.74□□□□□ -1.97
PMS1-215ENST00000447232 AP1S2P56377 157 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 CARD18P57730 90 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 LCN2P80188 198 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 MGAT2Q10469 447 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 DCTN2Q13561 401 aaKnown RBP2.74□□□□□ -1.97
PMS1-215ENST00000447232 EFR3AQ14156 821 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 LGSNQ5TDP6 509 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 C6orf163Q5TEZ5 329 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 ZFAND6Q6FIF0 208 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 CENPUQ71F23 418 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 LRRC70Q7Z2Q7 622 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 KRT77Q7Z794 578 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 THOC6Q86W42 341 aaKnown RBP2.74□□□□□ -1.97
PMS1-215ENST00000447232 CNTN4Q8IWV2 1026 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 SLC43A2Q8N370 569 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 PARP8Q8N3A8 854 aa2.74□□□□□ -1.97
PMS1-215ENST00000447232 SRFBP1Q8NEF9 429 aaKnown RBP2.74□□□□□ -1.97
PMS1-215ENST00000447232 Q8NFD4 153 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms