RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 COX15Q7KZN9 410 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 C9orf40Q8IXQ3 194 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 PRR22Q8IZ63 422 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 MFSD4AQ8N468 514 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 AMER2Q8N7J2 671 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 MCFD2Q8NI22 146 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 TM9SF4Q92544 642 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 LCORQ96JN0 433 aaPredicted RBP16.03■□□□□ 0.16
SMC6-206ENST00000446852 DACH2Q96NX9 599 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 IFT27Q9BW83 186 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 HCAR1Q9BXC0 346 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 NRSN2Q9GZP1 204 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 MED20Q9H944 212 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 UBQLN4Q9NRR5 601 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 RPS6KB2Q9UBS0 482 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 TMEM129A0AVI4 362 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 FRG2CA6NGY1 282 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 METTL15A6NJ78 407 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 BMP4P12644 408 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 WNT4P56705 351 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 CCL7P80098 99 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 EBPQ15125 230 aaKnown RBP16.02■□□□□ 0.16
SMC6-206ENST00000446852 TMEM44Q2T9K0 475 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 C16orf87Q6PH81 154 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 SHISA6Q6ZSJ9 500 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 LANCL3Q6ZV70 420 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 IGFN1Q86VF2 1251 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 PHC2Q8IXK0 858 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 SLC38A9Q8NBW4 561 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 OTULINQ96BN8 352 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 TRMT61AQ96FX7 289 aaKnown RBP16.02■□□□□ 0.16
SMC6-206ENST00000446852 SLC35A3Q9Y2D2 325 aa16.02■□□□□ 0.16
SMC6-206ENST00000446852 CDC14CA4D256 554 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 HCN1O60741 890 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 UTS2O95399 124 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 TIAF1O95411 115 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 SQSTM1Q13501 440 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 FCRLBQ6BAA4 426 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 B3GLCTQ6Y288 498 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 OAFQ86UD1 273 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 TMCO5AQ8N6Q1 288 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 OR2I1PQ8NGU4 316 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 FNDC8Q8TC99 324 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 TNFRSF13CQ96RJ3 184 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 CDADC1Q9BWV3 514 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 MCCC2Q9HCC0 563 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 HMG20AQ9NP66 347 aa16.02■□□□□ 0.15
SMC6-206ENST00000446852 MKKSQ9NPJ1 570 aaPredicted RBP16.02■□□□□ 0.15
SMC6-206ENST00000446852 CRYBB2P43320 205 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 FOXK2Q01167 660 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 CSTF1Q05048 431 aaKnown RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 SKP2Q13309 424 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZNF846Q147U1 533 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZNF404Q494X3 552 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 RHBDD2Q6NTF9 364 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 NIPAL3Q6P499 406 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 CBLN3Q6UW01 205 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 LHFPL3Q86UP9 236 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 SIRT6Q8N6T7 355 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 GATAD2BQ8WXI9 593 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 EDAQ92838 391 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 C3orf49Q96BT1 292 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ADOQ96SZ5 270 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 CMC2Q9NRP2 79 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 CFL2Q9Y281 166 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 EXOGQ9Y2C4 368 aaKnown RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 EXOSC1Q9Y3B2 195 aaKnown RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 A0A087WUJ7 227 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 C2orf92A0A1B0GVN3 265 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 LAMTOR5O43504 91 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 CFIP05156 583 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ANKRD34CP0C6C1 535 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ADH7P40394 386 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 SLC1A3P43003 542 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZNF362Q5T0B9 420 aaPredicted RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZNF527Q8NB42 609 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZNF485Q8NCK3 441 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 OR14A16Q8NHC5 309 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 NACC2Q96BF6 587 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 ZNF649Q9BS31 505 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 FN3KQ9H479 309 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 GAREM1Q9H706 876 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 PALMDQ9NP74 551 aa16.01■□□□□ 0.15
SMC6-206ENST00000446852 CHCHD3Q9NX63 227 aaKnown RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 CCDC59Q9P031 241 aaKnown RBP16.01■□□□□ 0.15
SMC6-206ENST00000446852 IGHV5-10-1A0A0J9YXX1 117 aa16■□□□□ 0.15
SMC6-206ENST00000446852 LRRN3E7EW58 273 aa16■□□□□ 0.15
SMC6-206ENST00000446852 PPP1R3DO95685 299 aa16■□□□□ 0.15
SMC6-206ENST00000446852 UBL4AP11441 157 aa16■□□□□ 0.15
SMC6-206ENST00000446852 SLITRK4Q8IW52 837 aa16■□□□□ 0.15
SMC6-206ENST00000446852 PHOSPHO1Q8TCT1 267 aa16■□□□□ 0.15
SMC6-206ENST00000446852 DAZLQ92904 295 aaKnown RBP16■□□□□ 0.15
SMC6-206ENST00000446852 OR6C1Q96RD1 312 aa16■□□□□ 0.15
SMC6-206ENST00000446852 HOXD1Q9GZZ0 328 aa16■□□□□ 0.15
SMC6-206ENST00000446852 LRRN3Q9H3W5 708 aa16■□□□□ 0.15
SMC6-206ENST00000446852 EXOSC4Q9NPD3 245 aaKnown RBP16■□□□□ 0.15
SMC6-206ENST00000446852 SEC14L4Q9UDX3 406 aa16■□□□□ 0.15
SMC6-206ENST00000446852 SRPK3Q9UPE1 567 aa16■□□□□ 0.15
SMC6-206ENST00000446852 SPIN1Q9Y657 262 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms