RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SF3B4Q15427 424 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 TIGD6Q17RP2 521 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC22A10Q63ZE4 541 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 KIRREL2Q6UWL6 708 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 FJX1Q86VR8 437 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 DTX1Q86Y01 620 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 VWA5B2Q8N398 1253 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR9Q2Q8NGE9 314 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF563Q8TA94 476 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MS4A6EQ96DS6 147 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MYNNQ9NPC7 610 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MAN2C1Q9NTJ4 1040 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 NPAP1Q9NZP6 1156 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 WARS2Q9UGM6 360 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 CAB39Q9Y376 341 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SF3B6Q9Y3B4 125 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 PCDHGB7Q9Y5F8 929 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 HS3ST3B1Q9Y662 390 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 A0A0B4J293 547 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 M0R129 80 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 CASKO14936 926 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 HCRTR1O43613 425 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 NOL3O60936 208 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 FAM20BO75063 409 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLITRK5O94991 958 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MSL3P1P0C860 447 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 COPZ1P61923 177 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 RBBP4Q09028 425 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 PTGES3Q15185 160 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 INPP5JQ15735 1006 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SAXO2Q658L1 398 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MYO7BQ6PIF6 2116 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 FAM198BQ6UWH4 519 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 TMEM64Q6YI46 380 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 VN1R4Q7Z5H5 301 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MMP21Q8N119 569 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 CIDECQ96AQ7 238 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF764Q96H86 408 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MS4A8Q9BY19 250 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SIAEQ9HAT2 523 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 TMEM165Q9HC07 324 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 MRPS18AQ9NVS2 196 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 KCMF1Q9P0J7 381 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 RPS6KB2Q9UBS0 482 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 PAIP2BQ9ULR5 123 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 POFUT2Q9Y2G5 429 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 YARS2Q9Y2Z4 477 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPC6Q9Y625 555 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SH3D21A4FU49 640 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 AIREO43918 545 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 E2F6O75461 281 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 ITGA10O75578 1167 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 OXSR1O95747 527 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCG5P05408 212 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 PTGER1P34995 402 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 RCVRNP35243 200 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC26A5P58743 744 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF763Q0D2J5 394 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 IL10RAQ13651 578 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 DUSP7Q16829 419 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF750Q32MQ0 723 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 RAET1LQ5VY80 246 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 DESI1Q6ICB0 168 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 CD300LDQ6UXZ3 194 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 BEST3Q8N1M1 668 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCAIQ8N9R8 606 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 COL21A1Q96P44 957 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 TRNT1Q96Q11 434 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 FANCFQ9NPI8 374 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 PPP4R1LQ9P1A2 415 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 A0A1W2PRB8 838 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 BLACEA4D250 179 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 DDAH2O95865 285 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 NR2F1P10589 423 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PSMB9P28065 219 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 MAN2A2P49641 1150 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 DGCR6Q14129 220 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 IGFBP7Q16270 282 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRTGQ2VWP7 1150 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 NXNL2Q5VZ03 156 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 C18orf63Q68DL7 685 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF367Q7RTV3 350 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ST6GAL2Q96JF0 529 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SFXN2Q96NB2 322 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 MIXL1Q9H2W2 232 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 REEP4Q9H6H4 257 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 REEP1Q9H902 201 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCN3BQ9NY72 215 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PCDHGB6Q9Y5F9 930 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 TPST2O60704 377 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR2J2O76002 312 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 KRT33AO76009 404 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 GAAP10253 952 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 RHAGQ02094 409 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ST3GAL4Q11206 333 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SPINK14Q6IE38 97 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ANKRD37Q7Z713 158 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 CA13Q8N1Q1 262 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 CELF2-AS1Q8N7Q2 184 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms