RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 LRRC3CA6NJW4 275 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 CDC40O60508 579 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHD3-204ENST00000439235 FPR1P21462 350 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 HTR3AP46098 478 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 DSCR4P56555 118 aaPredicted RBP18.82■□□□□ 0.6
CHD3-204ENST00000439235 SVOPLQ8N434 492 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 OR5K1Q8NHB7 308 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 RNF217Q8TC41 542 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 SDCCAG3Q96C92 435 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 MPP4Q96JB8 637 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 C12orf10Q9HB07 376 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 NTN4Q9HB63 628 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 ACER3Q9NUN7 267 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 MED17Q9NVC6 651 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 VNN3Q9NY84 501 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 DKKL1Q9UK85 242 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 TMCC3Q9ULS5 477 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 C15orf41Q9Y2V0 281 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 MED13Q9UHV7 2174 aa18.82■□□□□ 0.6
CHD3-204ENST00000439235 CEP295Q9C0D2 2601 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 B4DXG7 233 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 PNMTP11086 282 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 ZNF23P17027 643 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 MEOX1P50221 254 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 HMGA2P52926 109 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 TRIP10Q15642 601 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 TOMM34Q15785 309 aaPredicted RBP18.81■□□□□ 0.6
CHD3-204ENST00000439235 PLPPR5Q32ZL2 321 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 DCST1Q5T197 706 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 SHQ1Q6PI26 577 aaKnown RBP18.81■□□□□ 0.6
CHD3-204ENST00000439235 GRINAQ7Z429 371 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 HIPK1Q86Z02 1210 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 OR4C15Q8NGM1 316 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 OR52J3Q8NH60 311 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 SLC38A4Q969I6 547 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 ZBTB8AQ96BR9 441 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 C3orf49Q96BT1 292 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 NRBF2Q96F24 287 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 KLHDC3Q9BQ90 382 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 ARHGAP9Q9BRR9 750 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 MAN2C1Q9NTJ4 1040 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 CSAG2Q9Y5P2 127 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 U3KQV3 271 aa18.81■□□□□ 0.6
CHD3-204ENST00000439235 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 PINLYPA6NC86 204 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 SAC3D1A6NKF1 404 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ETV2O00321 342 aaPredicted RBP18.8■□□□□ 0.6
CHD3-204ENST00000439235 CASQ2O14958 399 aaPredicted RBP18.8■□□□□ 0.6
CHD3-204ENST00000439235 THY1P04216 161 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 PRKCAP17252 672 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 MST1P26927 711 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 DPP4P27487 766 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 LIMS1P48059 325 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 POLR2HP52434 150 aaKnown RBP18.8■□□□□ 0.6
CHD3-204ENST00000439235 DLX5P56178 289 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 PLGLB1Q02325 96 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 FOXO1Q12778 655 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 KCNAB2Q13303 367 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ZNF169Q14929 603 aaPredicted RBP18.8■□□□□ 0.6
CHD3-204ENST00000439235 EXOC3L2Q2M3D2 409 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ARSKQ6UWY0 536 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ZDHHC13Q8IUH4 622 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ABHD17AQ96GS6 310 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 MRGPRX4Q96LA9 322 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 GNRHR2Q96P88 292 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ALPK1Q96QP1 1244 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 C9orf16Q9BUW7 83 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ADAM19Q9H013 955 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 TUBD1Q9UJT1 453 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ZMIZ1Q9ULJ6 1067 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 OAZ3Q9UMX2 235 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 VDAC3Q9Y277 283 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 ATRXP46100 2492 aa18.8■□□□□ 0.6
CHD3-204ENST00000439235 URB1O60287 2271 aaKnown RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 TRBV4-1A0A0J9YWV2 114 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ELOA3DA6NLF2 546 aaPredicted RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 ACOT7O00154 380 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 CCNB2O95067 398 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 LYPD3O95274 346 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 HK1P19367 917 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 TACR3P29371 465 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 SRD5A2P31213 254 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 EIF1P41567 113 aaKnown RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 RBM34P42696 430 aaKnown RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 IST1P53990 364 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 FOXF1Q12946 379 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 SNCBQ16143 134 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ELOA3BQ3SY89 546 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 SLC25A53Q5H9E4 307 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ATG4DQ86TL0 474 aaPredicted RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 LINC00471Q8N535 108 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ZFP62Q8NB50 900 aaPredicted RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 ELOA3Q8NG57 546 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ACOT11Q8WXI4 607 aaPredicted RBP18.79■□□□□ 0.6
CHD3-204ENST00000439235 EME1Q96AY2 570 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 HS6ST2Q96MM7 605 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 TTTY12Q9BZ98 90 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ADNPQ9H2P0 1102 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 PRORYQ9H606 182 aa18.79■□□□□ 0.6
CHD3-204ENST00000439235 ACACAQ13085 2346 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms