RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ARSGQ96EG1 525 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 HINT3Q9NQE9 182 aaKnown RBP23.62■■□□□ 1.37
CPNE1-216ENST00000437340 U3KQA8 63 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 SLC2A10O95528 541 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 ATXN8OSP0DMR3 200 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 FUT1P19526 365 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 HOXD12P35452 270 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 HLA-BQ31612 363 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 ZNF404Q494X3 552 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 GUSBP11Q6P575 273 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 C16orf87Q6PH81 154 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 ZNF574Q6ZN55 896 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-216ENST00000437340 PLPP5Q8NEB5 264 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 MCFD2Q8NI22 146 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 EXOSC3Q9NQT5 275 aaKnown RBP23.61■■□□□ 1.37
CPNE1-216ENST00000437340 CMC2Q9NRP2 79 aa23.61■■□□□ 1.37
CPNE1-216ENST00000437340 METTL15A6NJ78 407 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 HPGDP15428 266 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 SOX3P41225 446 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 EFNA3P52797 238 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 C1orf189Q5VU69 101 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 RTL4Q6ZR62 310 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 RABEPKQ7Z6M1 372 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 CPOQ8IVL8 374 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 OR4D9Q8NGE8 314 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 FNDC8Q8TC99 324 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 LMF1Q96S06 567 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 IFT27Q9BW83 186 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 JAM3Q9BX67 310 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 TGIF2Q9GZN2 237 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 VN1R1Q9GZP7 353 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 NXF2Q9GZY0 626 aaKnown RBP23.6■■□□□ 1.37
CPNE1-216ENST00000437340 CARD8Q9Y2G2 431 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 CORINQ9Y5Q5 1042 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 MYO15AQ9UKN7 3530 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 SEC16AO15027 2179 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 RP1P56715 2156 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 A0A087WUJ7 227 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 CPED1A4D0V7 1026 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 HTR3EA5X5Y0 456 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 SCDO00767 359 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 SIGLEC6O43699 453 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 NGFRP08138 427 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 CPEP16870 476 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 FOXK2Q01167 660 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 TMED1Q13445 227 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 SOWAHCQ53LP3 525 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-216ENST00000437340 PERM1Q5SV97 790 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 ARMC4Q5T2S8 1044 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 THSD4Q6ZMP0 1018 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 TMPRSS9Q7Z410 1059 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 OAFQ86UD1 273 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 NUDT9Q9BW91 350 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 ENKD1Q9H0I2 346 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 ICAM5Q9UMF0 924 aa23.6■■□□□ 1.37
CPNE1-216ENST00000437340 ADAMTS20P59510 1910 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 C2orf92A0A1B0GVN3 265 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 GPX5O75715 221 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 UTS2O95399 124 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 IGHA1P01876 353 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 LIMS3P0CW19 117 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 LIMS4P0CW20 117 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 CRYZQ08257 329 aaKnown RBP23.59■■□□□ 1.37
CPNE1-216ENST00000437340 EBPQ15125 230 aaKnown RBP23.59■■□□□ 1.37
CPNE1-216ENST00000437340 ANKDD1AQ495B1 522 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 PHC2Q8IXK0 858 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 PSD4Q8NDX1 1056 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 CEP76Q8TAP6 659 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 SLC19A3Q9BZV2 496 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 MKL2Q9ULH7 1088 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 ATXN7L1Q9ULK2 861 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-216ENST00000437340 STUB1Q9UNE7 303 aa23.59■■□□□ 1.37
CPNE1-216ENST00000437340 OR6C76A6NM76 312 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 J3QRK9 145 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 TO15178 435 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 PPM1BO75688 479 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 IDUAP35475 653 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 NDUFAF6Q330K2 333 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 TRIM61Q5EBN2 209 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 TMCO5AQ8N6Q1 288 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 BBS1Q8NFJ9 593 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 NAT6Q93015 286 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 RNF167Q9H6Y7 350 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 GAREM1Q9H706 876 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 SIAEQ9HAT2 523 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 COPS7AQ9UBW8 275 aa23.58■■□□□ 1.37
CPNE1-216ENST00000437340 TRAV27A0A087WT01 109 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 APOL3O95236 402 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 IGF2P01344 180 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 UBL4AP11441 157 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SLC6A6P31641 620 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SLC1A3P43003 542 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 CRYBB2P43320 205 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SLC9A3P48764 834 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 RPS3AP61247 264 aaKnown RBP23.57■■□□□ 1.36
CPNE1-216ENST00000437340 HLA-DQA1Q5Y7H0 255 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 NIPAL3Q6P499 406 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 MEPCEQ7L2J0 689 aaKnown RBP23.57■■□□□ 1.36
CPNE1-216ENST00000437340 OR1N1Q8NGS0 311 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 OR2I1PQ8NGU4 316 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms