RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 MED17Q9NVC6 651 aa6.94□□□□□ -1.3
ECHDC1-207ENST00000430841 HIF3AQ9Y2N7 669 aa6.94□□□□□ -1.3
ECHDC1-207ENST00000430841 A0A087WV62 115 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 A0A096LPK6 155 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 C7orf72A4D263 438 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 E7ESA3 106 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ADAMDEC1O15204 470 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 POLR3GO15318 223 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 NME6O75414 186 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 CRCPO75575 148 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 RAD51DO75771 328 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 KLHL2O95198 593 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 CD8AP01732 235 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 CFPP27918 469 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 GABRA3P34903 492 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 CCR4P51679 360 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 PRR5P85299 388 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 DUSP2Q05923 314 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 SLC18A2Q05940 514 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 DLG1Q12959 904 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 RASA2Q15283 850 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 GRAMD1BQ3KR37 738 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ARL13AQ5H913 290 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 MFSD12Q6NUT3 480 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 UGT2A3Q6UWM9 527 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 RINLQ6ZS11 566 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 Q6ZSR9 355 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 NUFIP2Q7Z417 695 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 TRABD2AQ86V40 505 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 CREG2Q8IUH2 290 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 MREGQ8N565 214 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 OR7G2Q8NG99 324 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 OR4F6Q8NGB9 312 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 OR52N5Q8NH56 324 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 B4GALNT2Q8NHY0 566 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ZFP28Q8NHY6 868 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ACTRT2Q8TDY3 377 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ZNF418Q8TF45 676 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ZFP90Q8TF47 636 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 FBXO17Q96EF6 278 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 ZNF681Q96N22 645 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 HBEGFQ99075 208 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 VRK1Q99986 396 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 RHOXF2Q9BQY4 288 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 INPP5KQ9BT40 448 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 DPH5Q9H2P9 285 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 FLRT3Q9NZU0 649 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 STK38LQ9Y2H1 464 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 SNX24Q9Y343 169 aa6.93□□□□□ -1.3
ECHDC1-207ENST00000430841 PLCE1Q9P212 2302 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 IGLV3-32A0A0A0MS00 114 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 A0A0J9YW62 118 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 LOC390937A0A1W2PQ73 354 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 OR5H1A6NKK0 313 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 STX16-NPEPL1H3BU86 382 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 CCDC188H7C350 402 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 GTPBP1O00178 669 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 OR7A17O14581 309 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 STX16O14662 325 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ULK1O75385 1050 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 NTN1O95631 604 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 C2P06681 752 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ANXA4P09525 319 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 MTHFD2P13995 350 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 DDX5P17844 614 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 TAC1P20366 129 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ENPP1P22413 925 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 IVDP26440 423 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 TIA1P31483 386 aaKnown RBP eCLIP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 PHBP35232 272 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 NR4A2P43354 598 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 OR3A2P47893 321 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 CHN2P52757 468 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 PRKAG1P54619 331 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 PSG6Q00889 435 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 BTKQ06187 659 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ZNF763Q0D2J5 394 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 C2orf80Q0P641 193 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 RASGEF1BQ0VAM2 473 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 GALNT1Q10472 559 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 FOXF1Q12946 379 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 HSPB3Q12988 150 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 TRAF3Q13114 568 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 PLPPR5Q32ZL2 321 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 TMEM176BQ3YBM2 270 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 Q6ZS46 218 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ATG4DQ86TL0 474 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 CENPLQ8N0S6 344 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 TEX29Q8N6K0 151 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 ZNF614Q8N883 585 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 COX18Q8N8Q8 333 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 NOA1Q8NC60 698 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 SPATA4Q8NEY3 305 aa6.92□□□□□ -1.3
ECHDC1-207ENST00000430841 OR6Y1Q8NGX8 325 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms