RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CLDN2P57739 230 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MRPS21P82921 87 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 DBPQ10586 325 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MEF2DQ14814 521 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MPPED2Q15777 294 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 MICAQ29983 383 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SFRP5Q5T4F7 317 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 DPY19L2P1Q6NXN4 242 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ASCC1Q8N9N2 400 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 OR14A16Q8NHC5 309 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TMEM239Q8WW34 195 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 EDAQ92838 391 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 TSSK2Q96PF2 358 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 UHRF2Q96PU4 802 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SLC46A2Q9BY10 475 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 PRELID1Q9Y255 219 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 NOSIPQ9Y314 301 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 NPIPA5A0A0B4J1W7 369 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 NPIPA7E9PJI5 369 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 RAB3DO95716 219 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 NPIPA8P0DM63 369 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CDKN2DP55273 166 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 HES1Q14469 280 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 DUSP7Q16829 419 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF684Q5T5D7 378 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 WBP2NLQ6ICG8 309 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SLC43A2Q8N370 569 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 H1FXQ92522 213 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CNTNAP3BQ96NU0 1288 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CACNG6Q9BXT2 260 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 RNF38Q9H0F5 515 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 METTL9Q9H1A3 318 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 HRASLSQ9HDD0 168 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 NXT1Q9UKK6 140 aaKnown RBP8.39□□□□□ -1.07
CTNND1-208ENST00000428599 SLC22A7Q9Y694 548 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 CACNA1SQ13698 1873 aa8.39□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF736B4DX44 427 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 DCNP07585 359 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SLC35E2BP0CK96 405 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 HTR5AP47898 357 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 GSK3AP49840 483 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF674Q2M3X9 581 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF791Q3KP31 576 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 CDONQ4KMG0 1287 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 C9orf135Q5VTT2 229 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 FAM198BQ6UWH4 519 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 OR52E1Q8NGJ3 308 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 OR5W2Q8NH69 310 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 BSCL2Q96G97 398 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 NKX3-1Q99801 234 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ALG8Q9BVK2 526 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 DPCDQ9BVM2 203 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 GNB4Q9HAV0 340 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 HIDE1A8MVS5 230 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 DENRO43583 198 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SNAP29O95721 258 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 AKAIN1P0CW23 69 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ARSDP51689 593 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 GABARAPL2P60520 117 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RPL11P62913 178 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 NKX6-1P78426 367 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 IRF4Q15306 451 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 MPEG1Q2M385 716 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SLC36A2Q495M3 483 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 TP53I3Q53FA7 332 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 IER5LQ5T953 404 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RBMS3Q6XE24 437 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 FAM160A2Q8N612 972 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ARL11Q969Q4 196 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 MSANTD3Q96H12 275 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SLC45A3Q96JT2 553 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 PRRT1Q99946 306 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF286AQ9HBT8 521 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 TRAPPC2LQ9UL33 140 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 GPR52Q9Y2T5 361 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF337Q9Y3M9 751 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 NAP1L6A6NFF2 107 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 F5H5P2 479 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 UBFD1O14562 309 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 FANCGO15287 622 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RAD1O60671 282 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 APOC3P02656 99 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 FGF3P11487 239 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SERPINA2P20848 420 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 P2RX1P51575 399 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 HNRNPA1L2Q32P51 320 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 CLECL1Q8IZS7 167 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 OR6T1Q8NGN1 323 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 STT3BQ8TCJ2 826 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZMYND19Q96E35 227 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF845Q96IR2 970 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 A0A1W2PQ09 198 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 OR52A4PA6NMU1 304 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 KLRC4-KLRK1H3BQV0 150 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SDHDO14521 159 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SRPX2O60687 465 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 TK1P04183 234 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms