RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 POC1AQ8NBT0 407 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF248Q8NDW4 579 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 OR13C5Q8NGS8 318 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 LGALS14Q8TCE9 139 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 MRAPQ8TCY5 172 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SLC38A5Q8WUX1 472 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 HSD17B8Q92506 261 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 BPIFA2Q96DR5 249 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TXNDC15Q96J42 360 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RNF170Q96K19 258 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 FAM84BQ96KN1 310 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SERPINB11Q96P15 392 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 CYP2S1Q96SQ9 504 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 MBOAT4Q96T53 435 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 KXD1Q9BQD3 176 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 FEM1AQ9BSK4 669 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 DCTN5Q9BTE1 182 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 DCUN1D5Q9BTE7 237 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GPR174Q9BXC1 333 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 QTRT1Q9BXR0 403 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 PARD6GQ9BYG4 376 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ULBP2Q9BZM5 246 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TOLLIPQ9H0E2 274 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 C1orf198Q9H425 327 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 PIGUQ9H490 435 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 NXF3Q9H4D5 531 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RHOJQ9H4E5 214 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ATP13A3Q9H7F0 1226 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF665Q9H7R5 613 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 WDR54Q9H977 334 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 FOLH1BQ9HBA9 442 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 NMRAL1Q9HBL8 299 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ANKHQ9HCJ1 492 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RAVER2Q9HCJ3 691 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SLC17A5Q9NRA2 495 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ABCB10Q9NRK6 738 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 INPP5EQ9NRR6 644 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TECRQ9NZ01 308 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 KLRF1Q9NZS2 232 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GHRLQ9UBU3 117 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 IL36AQ9UHA7 158 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 MYO6Q9UM54 1294 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 EIF3LQ9Y262 564 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 HYOU1Q9Y4L1 999 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ROCK1Q13464 1354 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 USP47Q96K76 1375 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MAP3K5Q99683 1374 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 USP42Q9H9J4 1324 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TRBV9A0A0B4J1U6 114 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 A0A0J9YVX5 310 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SERINC4A6NH21 518 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 GOLGA6L10A6NI86 522 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SAGE2PA6NJ88 616 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 A8MX80 341 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF732B4DXR9 585 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 C2CD4DB7Z1M9 353 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 H3BN98 237 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SH2D1BO14796 132 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 B4GAT1O43505 415 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RFPL2O75678 378 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 GPX5O75715 221 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ZMPSTE24O75844 475 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 B3GAT3O94766 335 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 DIRAS1O95057 198 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 BMP10O95393 424 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 HLA-HP01893 362 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 APOHP02749 345 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 GAPDHP04406 335 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 IGF1P05019 195 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CD3GP09693 182 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PET100P0DJ07 73 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MBL2P11226 248 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 GPX3P22352 226 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 HSD11B1P28845 292 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 DUTP33316 252 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 UGT1A3P35503 534 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PIGAP37287 484 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CSKP41240 450 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MAGEA5P43359 124 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 KIR3DL2P43630 455 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CX3CR1P49238 355 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RGS6P49758 472 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CCR8P51685 355 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ATP6V0D1P61421 351 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 HOXA4Q00056 320 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ZP4Q12836 540 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 KLRB1Q12918 225 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TRAF2Q12933 501 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 KLF5Q13887 457 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TRAM2Q15035 370 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TMED2Q15363 201 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 OR4D1Q15615 310 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SGCAQ16586 387 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CTF1Q16619 201 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PPP1R3AQ16821 1122 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 EXOC3L4Q17RC7 722 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SAMD4BQ5PRF9 694 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SEL1L2Q5TEA6 688 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SLC18B1Q6NT16 456 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 C11orf87Q6NUJ2 197 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms