RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 H3BNH8 94 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 H6PDO95479 791 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 IGHV3-9P01782 118 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 NTF4P34130 210 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF385BQ569K4 471 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 C1QTNF12Q5T7M4 302 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ANKRD26P1Q6NSI1 321 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 C3orf33Q6P1S2 294 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 TMPPEQ6ZT21 453 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 SLC22A9Q8IVM8 553 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 UBE2J2Q8N2K1 259 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 OR5W2Q8NH69 310 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ZFAND2BQ8WV99 257 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 DCAKDQ8WVC6 231 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 APH1AQ96BI3 265 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ARL8AQ96BM9 186 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 C3orf49Q96BT1 292 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 SORCS2Q96PQ0 1159 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 OR5B2Q96R09 309 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 TRMOQ9BU70 441 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 C1QTNF6Q9BXI9 259 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 KCNF1Q9H3M0 494 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 PIGUQ9H490 435 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ANKZF1Q9H8Y5 726 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 EMC3Q9P0I2 261 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 MALT1Q9UDY8 824 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 CCL27Q9Y4X3 112 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 PDLIM1O00151 329 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 GTPBP1O00178 669 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 KCNAB3O43448 404 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 EIF4E2O60573 245 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 DNAJA2O60884 412 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 EGR1P18146 543 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 PRPH2P23942 346 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 DIO1P49895 249 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 ATP12AP54707 1039 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 IQCCQ4KMZ1 466 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 ABLIM2Q6H8Q1 611 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 BHLHB9Q6PI77 547 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 SZRD1Q7Z422 152 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 MTDHQ86UE4 582 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 LCA5Q86VQ0 697 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 OTUB1Q96FW1 271 aaPredicted RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 GSTO2Q9H4Y5 243 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 REEP4Q9H6H4 257 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 MID1IP1Q9NPA3 183 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 RRAGDQ9NQL2 400 aaPredicted RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 TMEFF2Q9UIK5 374 aaPredicted RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 NOSIPQ9Y314 301 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 DTNAQ9Y4J8 743 aa14.65□□□□□ -0.06
CHCHD3-202ENST00000423635 A0A0A6YYJ9 748 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 ZNF716A6NP11 495 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 NPIPB9F8W1W9 429 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 SLCO1B7G3V0H7 640 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 ITGA5P08648 1049 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 ATP6V1C1P21283 382 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 COMPP49747 757 aaPredicted RBP14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 FOXG1P55316 489 aaPredicted RBP14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 CSNK2A1P68400 391 aaPredicted RBP14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 QPRTQ15274 297 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 ZSWIM7Q19AV6 140 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 NDUFAF6Q330K2 333 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 FAM174BQ3ZCQ3 159 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 TIFABQ6ZNK6 161 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 C17orf78Q8N4C9 275 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 TOR1AIP2Q8NFQ8 470 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 SGMS2Q8NHU3 365 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 CDS1Q92903 461 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 PPCDCQ96CD2 204 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 FBXO17Q96EF6 278 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 FAM120BQ96EK7 910 aaKnown RBP14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 BHLHE41Q9C0J9 482 aaPredicted RBP14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 BPESC1Q9GZL8 116 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 TRAF6Q9Y4K3 522 aa14.64□□□□□ -0.07
CHCHD3-202ENST00000423635 NPIPA5A0A0B4J1W7 369 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 NPIPA7E9PJI5 369 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 H3BQF6 201 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 SULT2B1O00204 365 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 ZNF264O43296 627 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 SEC22BO75396 215 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 HMGN2P05204 90 aaKnown RBP14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 SNRPAP09012 282 aaKnown RBP14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 NPIPA8P0DM63 369 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 PDE7AQ13946 482 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 CBFBQ13951 182 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 MLC1Q15049 377 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 TIGD2Q4W5G0 525 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 C1orf162Q8NEQ5 155 aaPredicted RBP14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 JADE3Q92613 823 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 HPS1Q92902 700 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 ZMYND19Q96E35 227 aaPredicted RBP14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 SLC17A5Q9NRA2 495 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 SH3BP4Q9P0V3 963 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 DCTN4Q9UJW0 460 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 AMDHD2Q9Y303 409 aa14.63□□□□□ -0.07
CHCHD3-202ENST00000423635 POC1B-GALNT4F8VUJ3 575 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 GPR171O14626 319 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 MRPL33O75394 65 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms