RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 GPR52Q9Y2T5 361 aa22.73■■□□□ 1.23
SMDT1-202ENST00000422252 HEATR5AQ86XA9 2040 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 PGCP20142 388 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 PSMB1P20618 241 aaKnown RBP22.72■■□□□ 1.23
SMDT1-202ENST00000422252 EPHA3P29320 983 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 IL12AP29459 219 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 HOXC12P31275 282 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 SLC18A1P54219 525 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 SESN3P58005 492 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 ACKR1Q16570 336 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 FRRS1Q6ZNA5 592 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 NUFIP2Q7Z417 695 aaKnown RBP22.72■■□□□ 1.23
SMDT1-202ENST00000422252 ZNF619Q8N2I2 560 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 TRIML2Q8N7C3 387 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 FAM71CQ8NEG0 241 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 TMEM234Q8WY98 164 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 PIGTQ969N2 578 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 PIP5K1AQ99755 562 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 ACTR6Q9GZN1 396 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 QRSL1Q9H0R6 528 aaKnown RBP22.72■■□□□ 1.23
SMDT1-202ENST00000422252 WDR55Q9H6Y2 383 aaPredicted RBP22.72■■□□□ 1.23
SMDT1-202ENST00000422252 DLL4Q9NR61 685 aa22.72■■□□□ 1.23
SMDT1-202ENST00000422252 ZFHX3Q15911 3703 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 IGHV3-15A0A0B4J1V0 119 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 GOLGA8QA0A0J9YX86 632 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 GOLGA8OA6NCC3 632 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 GOLGA8NF8WBI6 632 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 PGRP06401 933 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 YES1P07947 543 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 KITP10721 976 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 FPR1P21462 350 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 ENPP1P22413 925 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 PGM1P36871 562 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 HPCAP84074 193 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 GPAT3Q53EU6 434 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 BEX5Q5H9J7 111 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 ATG16L1Q676U5 607 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 TFAP2EQ6VUC0 442 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 PANX1Q96RD7 426 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 TACO1Q9BSH4 297 aaKnown RBP22.71■■□□□ 1.23
SMDT1-202ENST00000422252 SERINC1Q9NRX5 453 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 ACER3Q9NUN7 267 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 GPR45Q9Y5Y3 372 aa22.71■■□□□ 1.23
SMDT1-202ENST00000422252 CCDC154A6NI56 674 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 C9JVG2 144 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 HMGN4O00479 90 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 KLF4O43474 513 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 DIAPH2O60879 1101 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 H6PDO95479 791 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 FOSL1P15407 271 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 MAGOHP61326 146 aaKnown RBP22.7■■□□□ 1.22
SMDT1-202ENST00000422252 NKX6-1P78426 367 aaPredicted RBP22.7■■□□□ 1.22
SMDT1-202ENST00000422252 LRRC74AQ0VAA2 488 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 MERTKQ12866 999 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 RNF130Q86XS8 419 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 RAB3IL1Q8TBN0 382 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 ZG16BQ96DA0 208 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 OR5B2Q96R09 309 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 OR52E6Q96RD3 313 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 ZBTB18Q99592 522 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 NKIRAS1Q9NYS0 192 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 KLHL9Q9P2J3 617 aa22.7■■□□□ 1.22
SMDT1-202ENST00000422252 SETD2Q9BYW2 2564 aaPredicted RBP22.69■■□□□ 1.22
SMDT1-202ENST00000422252 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.69■■□□□ 1.22
SMDT1-202ENST00000422252 PRAMEF27A3QJZ7 478 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 SLCO1B7G3V0H7 640 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 ERLIN1O75477 346 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 GCM2O75603 506 aaPredicted RBP22.69■■□□□ 1.22
SMDT1-202ENST00000422252 C1QCP02747 245 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 SHEQ5VZ18 495 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 C20orf204Q6ZNR8 217 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 PLEKHM3Q6ZWE6 761 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 KRTAP1-3Q8IUG1 177 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 GABRG1Q8N1C3 465 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 STEAP2Q8NFT2 490 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 PSD2Q9BQI7 771 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 INPP5KQ9BT40 448 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 HDHD5Q9BXW7 423 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 MANSC1Q9H8J5 431 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 BCO1Q9HAY6 547 aa22.69■■□□□ 1.22
SMDT1-202ENST00000422252 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.69■■□□□ 1.22
SMDT1-202ENST00000422252 SMPD2O60906 423 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 BCAS1O75363 584 aaPredicted RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 CDKN2CP42773 168 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 ANXA11P50995 505 aaKnown RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 KCNJ10P78508 379 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 TXNL4AP83876 142 aaKnown RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 CHRNEQ04844 493 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 ZNF621Q6ZSS3 439 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 HMGN2P46Q86SG4 172 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 WFDC8Q8IUA0 241 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 LRRC75A-AS1Q8N1F1 130 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 GLB1L3Q8NCI6 653 aaPredicted RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 ZNF563Q8TA94 476 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 SLC25A43Q8WUT9 341 aaPredicted RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 TRNT1Q96Q11 434 aaKnown RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 CCL19Q99731 98 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 TMBIM4Q9HC24 238 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 EXOSC3Q9NQT5 275 aaKnown RBP22.68■■□□□ 1.22
SMDT1-202ENST00000422252 ING1Q9UK53 422 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms