RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 FAM228BP0C875 321 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 CDH1P12830 882 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PTMSP20962 102 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PCMT1P22061 227 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 RPS3P23396 243 aaKnown RBP eCLIP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 IMPA1P29218 277 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 DEKP35659 375 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 GGT5P36269 586 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 SLC6A12P48065 614 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 RAB38P57729 211 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 STXBP1P61764 594 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 BTN3A2P78410 334 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 CDH17Q12864 832 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 SERTAD2Q14140 314 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 NTRK2Q16620 822 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PARP6Q2NL67 630 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ODF3L2Q3SX64 289 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF672Q499Z4 452 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 IQCCQ4KMZ1 466 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 LRRC38Q5VT99 294 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 LIPMQ5VYY2 423 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ARMC3Q5W041 872 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 SDCCAG8Q86SQ7 713 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 KIAA1328Q86T90 577 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 YRDCQ86U90 279 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF321PQ8N8H1 164 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 SNX31Q8N9S9 440 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 FAM47BQ8NA70 645 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 TRPV3Q8NET8 790 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 OR13J1Q8NGT2 312 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 RAB3IL1Q8TBN0 382 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 NT5CQ8TCD5 201 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 UTP15Q8TED0 518 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PTPMT1Q8WUK0 201 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 KCTD4Q8WVF5 259 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PYCR2Q96C36 320 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 MSI2Q96DH6 328 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 C11orf24Q96F05 449 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 RBM18Q96H35 190 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 BTBD9Q96Q07 612 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PIMREGQ9BSJ6 248 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 FUZQ9BT04 418 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 HAUS8Q9BT25 410 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 TRAF4Q9BUZ4 470 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 NPLQ9BXD5 320 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 CACNG6Q9BXT2 260 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ACTR6Q9GZN1 396 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 UBQLN3Q9H347 655 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 C10orf88Q9H8K7 445 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PROK2Q9HC23 129 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ZNHIT6Q9NWK9 470 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 TEX10Q9NXF1 929 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 CISD1Q9NZ45 108 aaKnown RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 STEAP1Q9UHE8 339 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 B3GALT5Q9Y2C3 310 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 DLGAP4Q9Y2H0 992 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 APOC4-APOC2K7ER74 178 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 CTNSO60931 367 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 NIPSNAP2O75323 286 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 PTP4A3O75365 173 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 WDR47O94967 919 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 VENTXO95231 258 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 TGM6O95932 706 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 APOC2P02655 101 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SERPING1P05155 500 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 PTMAP06454 111 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 HIST1H2AGP0C0S8 130 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 HIST1H2ADP20671 130 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 TCEA1P23193 301 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 ADRA1DP25100 572 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 PSMA3P25788 255 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 FMO4P31512 558 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 HPDP32754 393 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 RPL22P35268 128 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 AHRP35869 848 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SLC1A1P43005 524 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 STARP49675 285 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 EIF3EP60228 445 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 TIAL1Q01085 375 aaKnown RBP eCLIP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 KCNJ11Q14654 390 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 RBBP5Q15291 538 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 TBCEQ15813 527 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 PGGHGQ32M88 737 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 ACSBG2Q5FVE4 666 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 TOR1AIP1Q5JTV8 583 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 NCMAPQ5T1S8 102 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 CASC4Q6P4E1 433 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SHQ1Q6PI26 577 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SLC22A25Q6T423 547 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 KLHL24Q6TFL4 600 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 LCTLQ6UWM7 567 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 ANGPTL8Q6UXH0 198 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 PPP1R21Q6ZMI0 780 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 FAM57BQ71RH2 274 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms