RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ZNF440Q8IYI8 595 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 BPIFB6Q8NFQ5 453 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 TOR1AIP2Q8NFQ8 470 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 TSPAN14Q8NG11 270 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 SLC22A8Q8TCC7 542 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 OIT3Q8WWZ8 545 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 NKD1Q969G9 470 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 ZNF426Q9BUY5 554 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 CDCP1Q9H5V8 836 aa15.5■□□□□ 0.07
CALD1-204ENST00000417172 LRRN3E7EW58 273 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 SLC1A7O00341 560 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 NUDT14O95848 222 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 FBXO45P0C2W1 286 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 FPR3P25089 353 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 ATP1A4Q13733 1029 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 CLEC12AQ5QGZ9 265 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 ZNF563Q8TA94 476 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 SPACA9Q96E40 222 aaPredicted RBP15.49■□□□□ 0.07
CALD1-204ENST00000417172 PAK1IP1Q9NWT1 392 aaPredicted RBP15.49■□□□□ 0.07
CALD1-204ENST00000417172 DLL3Q9NYJ7 618 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 MED31Q9Y3C7 131 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 MED13Q9UHV7 2174 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 DPPA5A6NC42 116 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 C21orf140B9A014 251 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 CDC40O60508 579 aaKnown RBP eCLIP15.49■□□□□ 0.07
CALD1-204ENST00000417172 CRHBPP24387 322 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 GAS1P54826 345 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 NUP107P57740 925 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 PSPHP78330 225 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 PRKCDQ05655 676 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 COX10Q12887 443 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 INPP5JQ15735 1006 aaPredicted RBP15.49■□□□□ 0.07
CALD1-204ENST00000417172 KCTD21Q4G0X4 260 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 B3GNTL1Q67FW5 361 aaPredicted RBP15.49■□□□□ 0.07
CALD1-204ENST00000417172 WBP2NLQ6ICG8 309 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 ACSM5Q6NUN0 579 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 POMZP3Q6PJE2 187 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 IL20RBQ6UXL0 311 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 IL22RA1Q8N6P7 574 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 SIRT6Q8N6T7 355 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 OR13C2Q8NGS9 318 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 HDAC2Q92769 488 aaKnown RBP15.49■□□□□ 0.07
CALD1-204ENST00000417172 RELTQ969Z4 430 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 TMCO6Q96DC7 493 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 BPIFA2Q96DR5 249 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 DNAJA3Q96EY1 480 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 NPAS1Q99742 590 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 GPR87Q9BY21 358 aa15.49■□□□□ 0.07
CALD1-204ENST00000417172 A0A087WUJ7 227 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 CDRT15L2A8MXV6 281 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 CCNA2P20248 432 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 GSTM3P21266 225 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 PTGDSP41222 190 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 FXYD6P3P58550 94 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 NHLH1Q02575 133 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 CRYZQ08257 329 aaKnown RBP15.48■□□□□ 0.07
CALD1-204ENST00000417172 GINS1Q14691 196 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 NTRK2Q16620 822 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 COL28A1Q2UY09 1125 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 ZNF791Q3KP31 576 aaPredicted RBP15.48■□□□□ 0.07
CALD1-204ENST00000417172 ATG4DQ86TL0 474 aaPredicted RBP15.48■□□□□ 0.07
CALD1-204ENST00000417172 IL4I1Q96RQ9 567 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 ENKD1Q9H0I2 346 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 ASCL3Q9NQ33 180 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 IMPAD1Q9NX62 359 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 KLRF1Q9NZS2 232 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 SELENONQ9NZV5 590 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 ENOPH1Q9UHY7 261 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 AKAP13Q12802 2813 aa15.48■□□□□ 0.07
CALD1-204ENST00000417172 IGKV1D-42A0A075B6H8 117 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 TRIM64A6NGJ6 449 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 ENO4A6NNW6 628 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 HPP00738 406 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 NAGAP17050 411 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 GABRB1P18505 474 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 TACR3P29371 465 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 TMED10P49755 219 aaKnown RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 NUDT6P53370 316 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 SRSF6Q13247 344 aaKnown RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 ZNF468Q5VIY5 522 aaPredicted RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 PRAMEF20Q5VT98 475 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 SLX4IPQ5VYV7 408 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 ZNF620Q6ZNG0 422 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 RASSF6Q6ZTQ3 369 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 NUP54Q7Z3B4 507 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 BCDIN3DQ7Z5W3 292 aaKnown RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 RNF113BQ8IZP6 322 aaKnown RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 OR5W2Q8NH69 310 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 RNF138Q8WVD3 245 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 DNAJA4Q8WW22 397 aaPredicted RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 MPP4Q96JB8 637 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 ANKRD10Q9NXR5 420 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 HSPE1-MOB4S4R3N1 261 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 TRAV27A0A087WT01 109 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 PTGES3LE9PB15 166 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 EIF4E2O60573 245 aaKnown RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 CLPTM1O96005 669 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 TFAP2AP05549 437 aa15.47■□□□□ 0.07
CALD1-204ENST00000417172 SAGP10523 405 aaPredicted RBP15.47■□□□□ 0.07
CALD1-204ENST00000417172 EEF1B2P24534 225 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms