RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 CBLN3Q6UW01 205 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 CXXC5Q7LFL8 322 aaKnown RBP12.38□□□□□ -0.43
PTPN6-203ENST00000416215 CROCCP3Q8IVE0 287 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 CMIPQ8IY22 773 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 PHOSPHO1Q8TCT1 267 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 RFKQ969G6 155 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 OR6C1Q96RD1 312 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 LRRN3Q9H3W5 708 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 UBQLN4Q9NRR5 601 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 H2AFY2Q9P0M6 372 aaPredicted RBP12.38□□□□□ -0.43
PTPN6-203ENST00000416215 MPDZO75970 2070 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 C2orf92A0A1B0GVN3 265 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 UTS2O95399 124 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 IL33O95760 270 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 LIMS3P0CW19 117 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 LIMS4P0CW20 117 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 PNLIPP16233 465 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 TUBA1BP68363 451 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 FOXK2Q01167 660 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 FHL1Q13642 323 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 C1DQ13901 141 aaKnown RBP12.38□□□□□ -0.43
PTPN6-203ENST00000416215 NXNL2Q5VZ03 156 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 TUBA1AQ71U36 451 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 COX15Q7KZN9 410 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 LNX2Q8N448 690 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 OR6Q1Q8NGQ2 317 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 MCFD2Q8NI22 146 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 TM9SF4Q92544 642 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 TRMT61AQ96FX7 289 aaKnown RBP12.38□□□□□ -0.43
PTPN6-203ENST00000416215 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 RTN4RQ9BZR6 473 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 EXOSC4Q9NPD3 245 aaKnown RBP12.38□□□□□ -0.43
PTPN6-203ENST00000416215 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 SUSD2Q9UGT4 822 aa12.38□□□□□ -0.43
PTPN6-203ENST00000416215 hCG_2014768A0A024R1R8 64 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 IGHV3-20A0A0C4DH32 117 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 EFCAB7A8K855 629 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 CLDN25C9JDP6 229 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 LRRTM2O43300 516 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 HTR1FP30939 366 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 RBM34P42696 430 aaKnown RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 NR0B1P51843 470 aaKnown RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 FNDC7Q5VTL7 733 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 C16orf87Q6PH81 154 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 PHC2Q8IXK0 858 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 PTP4A1Q93096 173 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 SLC35B4Q969S0 331 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 MKKSQ9NPJ1 570 aaPredicted RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 CHCHD3Q9NX63 227 aaKnown RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 NUP210LQ5VU65 1888 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 IGHV5-10-1A0A0J9YXX1 117 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 C17orf51A8MQB3 221 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 GMFGO60234 142 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 HCN1O60741 890 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 REM1O75628 298 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 PPP1R3DO95685 299 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 BMP4P12644 408 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 CRYBB2P43320 205 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 SLC9A3P48764 834 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 CCR4P51679 360 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 WNT4P56705 351 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 COPZ1P61923 177 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 MLLT11Q13015 90 aaPredicted RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 EBPQ15125 230 aaKnown RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 ZSWIM7Q19AV6 140 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 PRR23CQ6ZRP0 262 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 IGFN1Q86VF2 1251 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 DAZLQ92904 295 aaKnown RBP12.37□□□□□ -0.43
PTPN6-203ENST00000416215 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 C3orf49Q96BT1 292 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 CDADC1Q9BWV3 514 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 MCCC2Q9HCC0 563 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 CFL2Q9Y281 166 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
PTPN6-203ENST00000416215 A0A087WUJ7 227 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 FRG2CA6NGY1 282 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 METTL15A6NJ78 407 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 SCDO00767 359 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 TOX3O15405 576 aaPredicted RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ATP6V1E1P36543 226 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF404Q494X3 552 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 YOD1Q5VVQ6 348 aaPredicted RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 PWWP2BQ6NUJ5 590 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 STT3BQ8TCJ2 826 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 DTNBP1Q96EV8 351 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 RERGLQ9H628 205 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 FBXO8Q9NRD0 319 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 SPIN1Q9Y657 262 aaPredicted RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 PCNX3Q9H6A9 2034 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 IRGMA1A4Y4 181 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 GTPBP1O00178 669 aaKnown RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ICOSLGO75144 302 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms