RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 NDE1Q9NXR1 346 aa12.91□□□□□ -0.34
SAPCD1-208ENST00000415669 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
SAPCD1-208ENST00000415669 GMPR2Q9P2T1 348 aaKnown RBP12.91□□□□□ -0.34
SAPCD1-208ENST00000415669 STOML1Q9UBI4 398 aa12.91□□□□□ -0.34
SAPCD1-208ENST00000415669 AP4B1Q9Y6B7 739 aa12.91□□□□□ -0.34
SAPCD1-208ENST00000415669 H0YC42 278 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 M0QX08 132 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 GSTA4O15217 222 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 TPST1O60507 370 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 OPN1LWP04000 364 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 PRG2P13727 222 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 CPN1P15169 458 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 IL11P20809 199 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 CALB2P22676 271 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 ADH6P28332 368 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 SFTPDP35247 375 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 PTGER4P35408 488 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 TPD52P55327 224 aaPredicted RBP12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 CLDN20P56880 219 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 EEFSECP57772 596 aaKnown RBP12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 NCALDP61601 193 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 COPZ1P61923 177 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 SRSF1Q07955 248 aaKnown RBP eCLIP12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 MERTKQ12866 999 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 SELENBP1Q13228 472 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 ACSF3Q4G176 576 aaPredicted RBP12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 SLC25A53Q5H9E4 307 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 RPTNQ6XPR3 784 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 PLEKHM3Q6ZWE6 761 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 COMTD1Q86VU5 262 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 ATP6V1C2Q8NEY4 427 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 TAMM41Q96BW9 452 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 TRIB1Q96RU8 372 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 TUBA1CQ9BQE3 449 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 ACER3Q9NUN7 267 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 FAM215AQ9Y5M1 114 aa12.9□□□□□ -0.34
SAPCD1-208ENST00000415669 HELZ2Q9BYK8 2649 aaKnown RBP12.9□□□□□ -0.35
SAPCD1-208ENST00000415669 AHRRA9YTQ3 701 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 FAAHO00519 579 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 EIF1AYO14602 144 aaKnown RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 NTN1O95631 604 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 EPPINO95925 133 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 ACAA2P42765 397 aaKnown RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 SUCLG1P53597 346 aaKnown RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 RGS8P57771 180 aaPredicted RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 RAC1P63000 192 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 HOXC5Q00444 222 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 SF3B4Q15427 424 aaKnown RBP eCLIP12.89□□□□□ -0.353e-7■■□□□ 13.3
SAPCD1-208ENST00000415669 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 CCDC80Q76M96 950 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 CHMP1BQ7LBR1 199 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 GGNQ86UU5 652 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 DEFB107AQ8IZN7 70 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 LILRA2Q8N149 483 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 MARVELD2Q8N4S9 558 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 RNF148Q8N7C7 305 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 PHF10Q8WUB8 498 aaKnown RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 RASSF5Q8WWW0 418 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 FIG4Q92562 907 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 DMRTA2Q96SC8 542 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 RSPO3Q9BXY4 272 aaPredicted RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 TMEM181Q9P2C4 612 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 PACSIN3Q9UKS6 424 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 MED12LQ86YW9 2145 aa12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 FASNP49327 2511 aaKnown RBP12.89□□□□□ -0.35
SAPCD1-208ENST00000415669 GJE1A6NN92 205 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 CLCA1A8K7I4 914 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 B2RBV5 119 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 KDM4EB2RXH2 506 aaPredicted RBP12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 M0R3H8 397 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 ETV2O00321 342 aaPredicted RBP12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 TNFSF11O14788 317 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 ZG16O60844 167 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 HOXD4P09016 255 aaPredicted RBP12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 SHC1P29353 583 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 SLC7A1P30825 629 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 CRYBA2P53672 197 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 NUP107P57740 925 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 RPS3AP61247 264 aaKnown RBP12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 ADORA2A-AS1P86434 159 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 PMPCAQ10713 525 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 DUSP7Q16829 419 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 TMEM211Q6ICI0 200 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 PPP4R4Q6NUP7 873 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 GPR32P1Q8NGA4 272 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 VANGL1Q8TAA9 524 aaPredicted RBP12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 ZPLD1Q8TCW7 415 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 SLC35B4Q969S0 331 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
SAPCD1-208ENST00000415669 TTYH2Q9BSA4 534 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms