RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CD1EP15812 388 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 PGCP20142 388 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 UGT2B10P36537 528 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 IDH2P48735 452 aaKnown RBP9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 STX1BP61266 288 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 PPP2R2AP63151 447 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 GUSBP1Q15486 140 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 TSC22D1Q15714 1073 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ZNF239Q16600 458 aaKnown RBP9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 TMEM201Q5SNT2 666 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 GTF2IRD2BQ6EKJ0 949 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 PLEKHM3Q6ZWE6 761 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 GTF2IRD2Q86UP8 949 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 VRK2Q86Y07 508 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 TUSC5Q8IXB3 177 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ARFGAP2Q8N6H7 521 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 OR6K3Q8NGY3 331 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 PIK3IP1Q96FE7 263 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ITCHQ96J02 903 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 C7orf26Q96N11 449 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 TRNT1Q96Q11 434 aaKnown RBP9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 MED18Q9BUE0 208 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 SLC38A1Q9H2H9 487 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 RMND5AQ9H871 391 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 COQ10BQ9H8M1 238 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 MTHFD2LQ9H903 347 aaPredicted RBP9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 TPT1P8Q9HAU6 139 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 TCF7L2Q9NQB0 619 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 POLE3Q9NRF9 147 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ACER3Q9NUN7 267 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 RLIMQ9NVW2 624 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ARGLU1Q9NWB6 273 aaPredicted RBP9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 ELOVL5Q9NYP7 299 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 SLC35A3Q9Y2D2 325 aa9.09□□□□□ -0.95
NCKIPSD-202ENST00000413374 APCP25054 2843 aa9.09□□□□□ -0.96
NCKIPSD-202ENST00000413374 A0A1W2PPR1 153 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 FAM234BA2RU67 622 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 NR5A2O00482 541 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 ADAM11O75078 769 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 SASH3O75995 380 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 PRKD3O94806 890 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 HRGP04196 525 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 BCHEP06276 602 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 NUDT7P0C024 238 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 GKN3PP0CG01 181 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 H2AFXP16104 143 aaPredicted RBP9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 IL7RP16871 459 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 DNASE1P24855 282 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 ELK4P28324 431 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 ANXA11P50995 505 aaKnown RBP9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 MVDP53602 400 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 PLAURQ03405 335 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 LRRC74AQ0VAA2 488 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 SF3A3Q12874 501 aaKnown RBP eCLIP9.08□□□□□ -0.963e-6■■■□□ 16.5
NCKIPSD-202ENST00000413374 SELENBP1Q13228 472 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 MAPK11Q15759 364 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 RPS26P11Q5JNZ5 115 aaPredicted RBP9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 LRRC74BQ6ZQY2 392 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 FCRLAQ7L513 359 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMEM234Q8WY98 164 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 GTF2H4Q92759 462 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 CPNE4Q96A23 557 aaPredicted RBP9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 CCDC167Q9P0B6 97 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 ST6GALNAC2Q9UJ37 374 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 LIPT1Q9Y234 373 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 TESMINQ9Y4I5 508 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 PCDHB14Q9Y5E9 798 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 PDZD2O15018 2839 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 ABCA12Q86UK0 2595 aa9.08□□□□□ -0.96
NCKIPSD-202ENST00000413374 INTS1Q8N201 2190 aaKnown RBP9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 PCNX3Q9H6A9 2034 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 DCHS2Q6V1P9 2916 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 AGAP5A6NIR3 686 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 HMGB1P1B2RPK0 211 aaPredicted RBP9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 SULT2B1O00204 365 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 CLIC1O00299 241 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 SIAH2O43255 324 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 TGDSO95455 350 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 GUSBP08236 651 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 PABPC4LP0CB38 370 aaKnown RBP9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 NCF2P19878 526 aaPredicted RBP9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 AGTR1P30556 359 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 CCKARP32238 428 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 DSTNP60981 165 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 KEAP1Q14145 624 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 TESK1Q15569 626 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 AGKQ53H12 422 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 PAGE3Q5JUK9 113 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 C3orf33Q6P1S2 294 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 STAC2Q6ZMT1 411 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 ADGRG3Q86Y34 549 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 FUNDC1Q8IVP5 155 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 OR52P1PQ8NH57 321 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 RNF128Q8TEB7 428 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 WDR60Q8WVS4 1066 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 CKAP2Q8WWK9 683 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 ST8SIA1Q92185 356 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms