RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 TRAV20A0A0B4J274 112 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 CACNB4O00305 520 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 AKR1C2P52895 323 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 AKR1C1Q04828 323 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 DSC1Q08554 894 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 GRM7Q14831 915 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 SERINC5Q86VE9 423 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 JAGN1Q8N5M9 183 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 BVESQ8NE79 360 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 RPS10P5Q9NQ39 176 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 HINT3Q9NQE9 182 aaKnown RBP12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 A0A0B4J203 849 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 SIGLEC6O43699 453 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 CMPK1P30085 196 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 FRKP42685 505 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 PDZK1IP1Q13113 114 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 THEM6Q8WUY1 208 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 HGDQ93099 445 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 OR14A2Q96R54 314 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 CHST8Q9H2A9 424 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 TAAR2Q9P1P5 351 aa12.97□□□□□ -0.33
CLTCL1-201ENST00000412649 SYN1P17600 705 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 SELENOPP49908 381 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 ZCCHC10Q8TBK6 192 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 LINC01599Q8WXQ3 324 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 RNF32Q9H0A6 362 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 GHITMQ9H3K2 345 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 MTHFD2LQ9H903 347 aaPredicted RBP12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 ISG20L2Q9H9L3 353 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 LPLP06858 475 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 NAGAP17050 411 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 CTSCP53634 463 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 RPL22L1Q6P5R6 122 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 NAXDQ8IW45 347 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 GOT1L1Q8NHS2 421 aaPredicted RBP12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 PLA2G12AQ9BZM1 189 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 LINC00597Q9H2U6 94 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 REV1Q9UBZ9 1251 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 LAMP5Q9UJQ1 280 aa12.96□□□□□ -0.33
CLTCL1-201ENST00000412649 GGT3PA6NGU5 568 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 ACOD1A6NK06 481 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 GPRIN2O60269 458 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 HLA-DQB1P01920 261 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 PRNPP04156 253 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 WNT1P04628 370 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 DCNP07585 359 aaKnown RBP12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 CD53P19397 219 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 PDHA2P29803 388 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC11A1P49279 550 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 DEFA6Q01524 100 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 CCSMST1Q4G0I0 132 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 LMNTD1Q8N9Z9 388 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 OR8D1Q8WZ84 308 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 S100A13Q99584 98 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF629Q9UEG4 869 aaPredicted RBP12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC35A3Q9Y2D2 325 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 MIA3Q5JRA6 1907 aa12.96□□□□□ -0.34
CLTCL1-201ENST00000412649 IFNA4P05014 189 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 S100A8P05109 93 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 HOXD4P09016 255 aaPredicted RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC35G6P0C7Q6 338 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 ITPKBP27987 946 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 MEOX2P50222 304 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 CLCNKAP51800 687 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 BTN3A2P78410 334 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 DECR1Q16698 335 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 MBOAT2Q6ZWT7 520 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 GALNTL5Q7Z4T8 443 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 LAS2Q8IYD9 372 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF683Q8IZ20 524 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF740Q8NDX6 193 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 FAM71CQ8NEG0 241 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 PHB2Q99623 299 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 IL36AQ9UHA7 158 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 TRBV5-4A0A0C4DH59 114 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 HMGN4O00479 90 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 LANCL1O43813 399 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 CBR1P16152 277 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 GALP22466 123 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 FXYD6P3P58550 94 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SIRPAP78324 504 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 AMZ1Q400G9 498 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 CDNFQ49AH0 187 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 RNASE10Q5GAN6 216 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms