RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ANGPTL4Q9BY76 406 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 C20orf85Q9H1P6 137 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 OR51J1Q9H342 316 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 PRDM12Q9H4Q4 367 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 VNN3Q9NY84 501 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 CACNG4Q9UBN1 327 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 A0A087X1B8 175 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 C9orf172C9J069 976 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CLIC1O00299 241 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 DPYSL4O14531 572 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 TOXO94900 526 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CD1BP29016 333 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 APLNRP35414 380 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CHRNA4P43681 627 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 JAK3P52333 1124 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 IRF9Q00978 393 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SREBF2Q12772 1141 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ODF4Q2M2E3 257 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 RFTN2Q52LD8 501 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF628Q5EBL2 1059 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 DLK2Q6UY11 383 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MED25Q71SY5 747 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 BIVMQ86UB2 503 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 LRRC56Q8IYG6 542 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 PROKR2Q8NFJ6 384 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 OR8U1Q8NH10 309 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 VOPP1Q96AW1 172 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 COA7Q96BR5 231 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ITCHQ96J02 903 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 LCORQ96JN0 433 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 OR2M2Q96R28 347 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 DDOQ99489 341 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF670Q9BS34 389 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PCED1AQ9H1Q7 454 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC38A1Q9H2H9 487 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SRMSQ9H3Y6 488 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 METTL7AQ9H8H3 244 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 NPDC1Q9NQX5 325 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 SMCO4Q9NRQ5 59 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 TMEM248Q9NWD8 314 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 HIF3AQ9Y2N7 669 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 NEUROG3Q9Y4Z2 214 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 COLEC10Q9Y6Z7 277 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SPACA6W5XKT8 324 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 A0A096LPI6 279 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 WDR27A2RRH5 827 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 IMPA2O14732 288 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC19A2O60779 497 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 IFNA21P01568 189 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 PIPP12273 146 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 MAPK8P45983 427 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 IDH2P48735 452 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 RGS4P49798 205 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SELENOPP49908 381 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 WNT4P56705 351 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ARF6P62330 175 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SIM1P81133 766 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 SRSF5Q13243 272 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 PPIGQ13427 754 aaKnown RBP eCLIP4.86□□□□□ -1.635e-8■□□□□ 9.7
HERC4-205ENST00000412272 ANKRD34AQ69YU3 496 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 USP17L2Q6R6M4 530 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 VASH2Q86V25 355 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 NRMQ8IXM6 262 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 RGL4Q8IZJ4 473 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 BHLHE23Q8NDY6 225 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 FAM71CQ8NEG0 241 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF675Q8TD23 568 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 GHSRQ92847 366 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 HIPK2Q9H2X6 1198 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PIGMQ9H3S5 423 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ABHD16BQ9H3Z7 469 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 FOXJ2Q9P0K8 574 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF629Q9UEG4 869 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 EGFL7Q9UHF1 273 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PKP3Q9Y446 797 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ORC6Q9Y5N6 252 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZCWPW2A0A1B0GU75 182 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF670-ZNF695F2Z2N8 137 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 HAS3O00219 553 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PHOX2AO14813 284 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 RGS14O43566 566 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ADAP1O75689 374 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 METTL18O95568 372 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 EFEMP2O95967 443 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PIGRP01833 764 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MT-ND1P03886 318 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CFHP08603 1231 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC35E2BP0CK96 405 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 RAB5AP20339 215 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF10P21506 573 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 RPL19P84098 196 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 MC1RQ01726 317 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 KHDC3LQ587J8 217 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 FAHD1Q6P587 224 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 LRRTM1Q86UE6 522 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 GLB1L2Q8IW92 636 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms