RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 IFITM1P13164 125 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 ERCC2P18074 760 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 DNAJB1P25685 340 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 IL12BP29460 328 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TM4SF1P30408 202 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 STARP49675 285 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 NUMBP49757 651 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TKTL1P51854 596 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 PRRX1P54821 245 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 FUT5Q11128 374 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 NSDHLQ15738 373 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TSTQ16762 297 aaKnown RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 C15orf59Q2T9L4 293 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 KRTAP25-1Q3LHN0 102 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 PYDC2Q56P42 97 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 CPTPQ5TA50 214 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 LINC00696Q6ZRV3 163 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 Q6ZS92 163 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 NTM-AS1Q6ZSK4 140 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 C6orf120Q7Z4R8 191 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 PCP2Q8IVA1 136 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 ANKRD13CQ8N6S4 541 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 SNX31Q8N9S9 440 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 RNF139Q8WU17 664 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 RNF133Q8WVZ7 376 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 CREB3L1Q96BA8 519 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 HAVCR1Q96D42 359 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TRIM44Q96DX7 344 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 ERGIC2Q96RQ1 377 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 PDCD1LG2Q9BQ51 273 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TIMM29Q9BSF4 260 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 CHAC1Q9BUX1 264 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 PRORYQ9H606 182 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 AKIRIN1Q9H9L7 192 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 HOXC10Q9NYD6 342 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 DOK5Q9P104 306 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 NEUROG3Q9Y4Z2 214 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 CLUHO75153 1309 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TDRD9Q8NDG6 1382 aaKnown RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 IGHV3-66A0A0C4DH42 116 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 LINC00854A0A1B0GVQ3 168 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 PI4KAP2A4QPH2 592 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 DHRS7CA6NNS2 312 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 XKRYO14609 159 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 TAPBPO15533 448 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 RBFOX2O43251 390 aaKnown RBP eCLIP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ERI3O43414 337 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ADAM20O43506 726 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 EFNA2O43921 213 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 KIAA0513O60268 411 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 SS18L1O75177 396 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ENTPD5O75356 428 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 LY6HO94772 140 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 CELF2O95319 508 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 CDS2O95674 445 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 CCNE2O96020 404 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 IGKV1-5P01602 117 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 OPN1LWP04000 364 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 PFN1P07737 140 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 CTSGP08311 255 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ETS2P15036 469 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 PGAM1P18669 254 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 CHMLP26374 656 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ADRA1AP35348 466 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 MTIF2P46199 727 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 HNRNPFP52597 415 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 MTCP1P56278 107 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 NLRP11P59045 1033 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 PTENP60484 403 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 KCNJ2P63252 427 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 UBXN2AP68543 259 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 DEFA5Q01523 94 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 FOLH1Q04609 750 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 SLC10A7Q0GE19 358 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 AP1B1Q10567 949 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 SNTB2Q13425 540 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZNF266Q14584 549 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 SLC9A3R2Q15599 337 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 HKDC1Q2TB90 917 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 CASP12Q6UXS9 341 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 Q6ZPB1 254 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 NET1Q7Z628 596 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 THOC6Q86W42 341 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 GPBP1Q86WP2 473 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 COA5Q86WW8 74 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZNF444Q8N0Y2 327 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 PGAM4Q8N0Y7 254 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZCCHC7Q8N3Z6 543 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 C10orf126Q8N4M7 172 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 LRRC52Q8N7C0 313 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 UXS1Q8NBZ7 420 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 FBXL13Q8NEE6 735 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 APPL2Q8NEU8 664 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 OR9A1PQ8NGU1 263 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 COQ8AQ8NI60 647 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 FAM213BQ8TBF2 198 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 ART4Q93070 314 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 EXOSC8Q96B26 276 aaKnown RBP-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 C12orf42Q96LP6 360 aa-1.22□□□□□ -2.6
RNU4-61P-201ENST00000411243 RUFY1Q96T51 708 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms