RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NRGNQ92686 78 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 PIK3IP1Q96FE7 263 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 WFIKKN1Q96NZ8 548 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 TRNT1Q96Q11 434 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 PIP5K1AQ99755 562 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 THUMPD3Q9BV44 507 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 SAP130Q9H0E3 1048 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 RAD21L1Q9H4I0 556 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 SERHL2Q9H4I8 314 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ARMC7Q9H6L4 198 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 PLEKHF2Q9H8W4 249 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ACER3Q9NUN7 267 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ZIM2Q9NZV7 527 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 MKLN1Q9UL63 735 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 KCNE3Q9Y6H6 103 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 NUP214P35658 2090 aaPredicted RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ITPR3Q14573 2671 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 RFXANKO14593 260 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 DNAJA2O60884 412 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 SLC22A3O75751 556 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 CNOT4O95628 575 aaKnown RBP8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 DBIP07108 87 aaKnown RBP8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 YES1P07947 543 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 UBTFL6P0CB48 400 aaPredicted RBP8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 KITP10721 976 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 FOSL1P15407 271 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 IL32P24001 234 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 EPHA3P29320 983 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 WDR4P57081 412 aaKnown RBP8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 KCNJ10P78508 379 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 MERTKQ12866 999 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 P2RY6Q15077 328 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 SYT14P1Q58G82 188 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 AGBL2Q5U5Z8 902 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 TYW3Q6IPR3 259 aaKnown RBP8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 LRRC74BQ6ZQY2 392 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF621Q6ZSS3 439 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 GRINAQ7Z429 371 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 RNF130Q86XS8 419 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 PEX5LQ8IYB4 626 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF440Q8IYI8 595 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 LRRC75A-AS1Q8N1F1 130 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 ATP6V1C2Q8NEY4 427 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 TLCD1Q96CP7 247 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 ITCHQ96J02 903 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 COQ10BQ9H8M1 238 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 TMBIM4Q9HC24 238 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 C6orf203Q9P0P8 240 aaPredicted RBP8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 P2RX2Q9UBL9 471 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 CLEC4AQ9UMR7 237 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 HDGFL3Q9Y3E1 203 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 GPR45Q9Y5Y3 372 aa8.11□□□□□ -1.11
SNORD88A-201ENST00000408314 MED13LQ71F56 2210 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 GOLGA8QA0A0J9YX86 632 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 GOLGA8OA6NCC3 632 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF724A8MTY0 619 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 DEFB108AA8MXU0 73 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 GOLGA8NF8WBI6 632 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 SULT2B1O00204 365 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 HMGN4O00479 90 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 GPR171O14626 319 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 UBDO15205 165 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 POLR3GO15318 223 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 OIP5O43482 229 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 FCMRO60667 390 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 SMPD2O60906 423 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 H6PDO95479 791 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 OPN1LWP04000 364 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 FESP07332 822 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ALDOCP09972 364 aaKnown RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ZCCHC18P0CG32 403 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 NR2F1P10589 423 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 TFPIP10646 304 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 IL7RP16871 459 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 KLK2P20151 261 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 PGM1P36871 562 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 CRISP3P54108 245 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 NME5P56597 212 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 SESN3P58005 492 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 UFM1P61960 85 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 TOMM34Q15785 309 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 NDUFAF6Q330K2 333 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 LIN52Q52LA3 116 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 BEND6Q5SZJ8 279 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 TFAP2EQ6VUC0 442 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 STAC2Q6ZMT1 411 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 FRRS1Q6ZNA5 592 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 PLEKHM3Q6ZWE6 761 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 GALNT5Q7Z7M9 940 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 P3H2Q8IVL5 708 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 CLEC4FQ8N1N0 589 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 MIER2Q8N344 545 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 PIGXQ8TBF5 258 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 LRRC8CQ8TDW0 803 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ABHD3Q8WU67 409 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 WDR60Q8WVS4 1066 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ROBO4Q8WZ75 1007 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 RAB8BQ92930 207 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms