RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 MRGPRX4Q96LA9 322 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ECSITQ9BQ95 431 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 SPATA9Q9BWV2 254 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 EFCAB1Q9HAE3 211 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 COQ3Q9NZJ6 369 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 RNF6Q9Y252 685 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 INTS1Q8N201 2190 aaKnown RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 A0A0G2JNJ9 132 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 EIF1AYO14602 144 aaKnown RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 NTN1O95631 604 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 SLC6A8P48029 635 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 RBBP4Q09028 425 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 POMZP3Q6PJE2 187 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CHMP1BQ7LBR1 199 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CALHM3Q86XJ0 350 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 GRAMD2AQ8IUY3 354 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 LILRA2Q8N149 483 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ATP6V1C2Q8NEY4 427 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 TMEM234Q8WY98 164 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ST8SIA1Q92185 356 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CMTM5Q96DZ9 223 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF607Q96SK3 696 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ACER3Q9NUN7 267 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 Q9UFV3 132 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 USP22Q9UPT9 525 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ANGPT4Q9Y264 503 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 A0A0J9YW62 118 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 CFAP73A6NFT4 308 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 FRS3O43559 492 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 TPST1O60507 370 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 GCM2O75603 506 aaPredicted RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 DCTN3O75935 186 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 AGAP20933 346 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ME2P23368 584 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ELK4P28324 431 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 SHC1P29353 583 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 PRDX6P30041 224 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 CEACAM8P31997 349 aaPredicted RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 SFTPDP35247 375 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 TIMP3P35625 211 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 EEFSECP57772 596 aaKnown RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 MERTKQ12866 999 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 EPS8Q12929 822 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ART3Q13508 389 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 VMACQ2NL98 169 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 CTU2Q2VPK5 515 aaKnown RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 RIPPLY2Q5TAB7 128 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 GKAP1Q5VSY0 366 aaPredicted RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 PLEKHM3Q6ZWE6 761 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 LSRQ86X29 649 aaPredicted RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF440Q8IYI8 595 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ANKS4BQ8N8V4 417 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 C9orf106Q8NAJ2 232 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF845Q96IR2 970 aaPredicted RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 GPATCH1Q9BRR8 931 aaKnown RBP13.12□□□□□ -0.31
CDPF1-203ENST00000404583 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 PINK1Q9BXM7 581 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 CLCF1Q9UBD9 225 aa13.12□□□□□ -0.31
CDPF1-203ENST00000404583 MBD3L4A6NDZ8 208 aaPredicted RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 MBD3L3A6NE82 208 aaPredicted RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 MBD3L5A6NJ08 208 aaPredicted RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 CCT8L1PA6NM43 557 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 M0QX08 132 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 TNFSF11O14788 317 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 SERPINB7O75635 380 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 TGM6O95932 706 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 IL2RAP01589 272 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 PRG2P13727 222 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 PRKAR1BP31321 381 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 EIF1AXP47813 144 aaKnown RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 CPA2P48052 419 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 NUDT2P50583 147 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 PCBP3P57721 371 aaKnown RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 RPS3AP61247 264 aaKnown RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 DMTNQ08495 405 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 SGCBQ16585 318 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 ZSWIM7Q19AV6 140 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 TMEM176BQ3YBM2 270 aaPredicted RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 COMTD1Q86VU5 262 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 SLC15A3Q8IY34 581 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 MBD3L2Q8NHZ7 208 aaPredicted RBP13.11□□□□□ -0.31
CDPF1-203ENST00000404583 CA5BP1Q8WTZ4 195 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 ADGRG7Q96K78 797 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 KLHL15Q96M94 604 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 UCN2Q96RP3 112 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 CTPS2Q9NRF8 586 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
CDPF1-203ENST00000404583 CMTM6Q9NX76 183 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms