RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 XKRXQ6PP77 449 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ARIH2OSQ8N7S6 290 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GDPD1Q8N9F7 314 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PTP4A1Q93096 173 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MRPL48Q96GC5 212 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 AHCYL2Q96HN2 611 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ART5Q96L15 291 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CUTCQ9NTM9 273 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PCDHGB7Q9Y5F8 929 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DAPL1A0PJW8 107 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PIAS2O75928 621 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SLC2A10O95528 541 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IL33O95760 270 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MT-ND5P03915 603 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RORAP35398 523 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RPS25P62851 125 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DNASE1L3Q13609 305 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MZT2AQ6P582 158 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CACTIN-AS1Q8N1I8 211 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 FAM71CQ8NEG0 241 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 BBS1Q8NFJ9 593 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR4N2Q8NGD1 307 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR13C2Q8NGS9 318 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GRHL3Q8TE85 626 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SPRYD4Q8WW59 207 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ACOT12Q8WYK0 555 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SGTBQ96EQ0 304 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PRO3102Q9H379 93 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C12orf10Q9HB07 376 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PLEKHB1Q9UF11 243 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NOX1Q9Y5S8 564 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TDRD6O60522 2096 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C12orf71A8MTZ7 269 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SOCS6O14544 535 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ARPC3O15145 178 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR2B3O76000 313 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CELP19835 753 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SLC2A5P22732 501 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NOS3P29474 1203 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SDC2P34741 201 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RFX3P48380 749 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ARL4DP49703 201 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PRPS1P60891 318 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PPP3R1P63098 170 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MAT1AQ00266 395 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 FABP5Q01469 135 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 LGALS3BPQ08380 585 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 WDR45BQ5MNZ6 344 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ZNF362Q5T0B9 420 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DPY19L2P2Q6ZN68 376 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 POMGNT2Q8NAT1 580 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ATP6V1C2Q8NEY4 427 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR51G2Q8NGK0 314 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CHAC2Q8WUX2 184 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 LIPHQ8WWY8 451 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ASB15Q8WXK1 588 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TMEM203Q969S6 136 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SENP5Q96HI0 755 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NDC1Q9BTX1 674 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CAPN10Q9HC96 672 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 LANCL2Q9NS86 450 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 LRIT1Q9P2V4 623 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C17orf105B2RV13 164 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 H3BMH7 237 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DUX1O43812 170 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SBK2P0C263 348 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GLB1P16278 677 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MAOAP21397 527 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PPM1FP49593 454 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 AFF3P51826 1226 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 WBP2NLQ6ICG8 309 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 THSD4Q6ZMP0 1018 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 D2HGDHQ8N465 521 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SIRT6Q8N6T7 355 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 KISS1RQ969F8 398 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CLDN23Q96B33 292 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 HSPA12BQ96MM6 686 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PTCHD1Q96NR3 888 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TNFRSF13CQ96RJ3 184 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TMEM43Q9BTV4 400 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ALG8Q9BVK2 526 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RBCK1Q9BYM8 510 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NDEL1Q9GZM8 345 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SPRTNQ9H040 489 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MIR1-1HGQ9H1L0 117 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TPK1Q9H3S4 243 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IL20RAQ9UHF4 553 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ZNF337Q9Y3M9 751 aa16.29■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SCN2AQ99250 2005 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IGKV3D-11A0A0A0MRZ8 115 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 FRG2CA6NGY1 282 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SEC14L5O43304 696 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PLPP2O43688 288 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 APOL3O95236 402 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 APEHP13798 732 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 HPGDP15428 266 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms