RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ACOT1Q86TX2 421 aa2□□□□□ -2.09
CD47-203ENST00000398258 TPRA1Q86W33 373 aa2□□□□□ -2.09
CD47-203ENST00000398258 VSTM4Q8IW00 320 aa2□□□□□ -2.09
CD47-203ENST00000398258 MCOLN2Q8IZK6 566 aa2□□□□□ -2.09
CD47-203ENST00000398258 SLC38A6Q8IZM9 456 aa2□□□□□ -2.09
CD47-203ENST00000398258 GPD1LQ8N335 351 aa2□□□□□ -2.09
CD47-203ENST00000398258 CADM2Q8N3J6 435 aa2□□□□□ -2.09
CD47-203ENST00000398258 OR5L2Q8NGL0 311 aa2□□□□□ -2.09
CD47-203ENST00000398258 RHOXF1Q8NHV9 184 aa2□□□□□ -2.09
CD47-203ENST00000398258 TRUB1Q8WWH5 349 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 CTNNBL1Q8WYA6 563 aaPredicted RBP2□□□□□ -2.09
CD47-203ENST00000398258 MRPS31Q92665 395 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 PSMG2Q969U7 264 aa2□□□□□ -2.09
CD47-203ENST00000398258 CYP2S1Q96SQ9 504 aa2□□□□□ -2.09
CD47-203ENST00000398258 SECISBP2Q96T21 854 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 TSSK1BQ9BXA7 367 aa2□□□□□ -2.09
CD47-203ENST00000398258 NAT10Q9H0A0 1025 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 ZNF385DQ9H6B1 395 aa2□□□□□ -2.09
CD47-203ENST00000398258 TMEM9Q9P0T7 183 aa2□□□□□ -2.09
CD47-203ENST00000398258 OR1A1Q9P1Q5 309 aa2□□□□□ -2.09
CD47-203ENST00000398258 ONECUT1Q9UBC0 465 aa2□□□□□ -2.09
CD47-203ENST00000398258 XPO7Q9UIA9 1087 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 PDE10AQ9Y233 779 aa2□□□□□ -2.09
CD47-203ENST00000398258 AK6Q9Y3D8 172 aaKnown RBP2□□□□□ -2.09
CD47-203ENST00000398258 ALG6Q9Y672 507 aa2□□□□□ -2.09
CD47-203ENST00000398258 IGLV3-10A0A075B6K4 115 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 IGHV1OR15-1A0A075B7D0 117 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 SYNJ2BP-COX16A0A087WUM0 186 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 IGHV7-81A0A0B4J1V7 117 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 METTL21EPA6NDL7 271 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 DHRS7CA6NNS2 312 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 SULT2B1O00204 365 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 WWP2O00308 870 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 HCRTR1O43613 425 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 PRKYO43930 277 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LYPLA1O75608 230 aaPredicted RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 SURF6O75683 361 aaKnown RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 PALMO75781 387 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 SCGNO76038 276 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LYPD3O95274 346 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LALBAP00709 142 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 PTGDSP41222 190 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 DHPSP49366 369 aaPredicted RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 PRKXP51817 358 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 EFNB2P52799 333 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 CRYBB1P53674 252 aaPredicted RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 RPS14P62263 151 aaKnown RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 EGFEM1PQ0D2K5 195 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LRRC36Q1X8D7 754 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 PAGE2BQ5JRK9 111 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 C10orf120Q5SQS8 335 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 ATF7IP2Q5U623 682 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 MARC1Q5VT66 337 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 Q6ZPB1 254 aaPredicted RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 PPP1R27Q86WC6 154 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 ZNF677Q86XU0 584 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 SKA3Q8IX90 412 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 CLEC4FQ8N1N0 589 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 STXBP6Q8NFX7 210 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 ZPLD1Q8TCW7 415 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 TMEM43Q9BTV4 400 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 RNF126Q9BV68 326 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 SPATA16Q9BXB7 569 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 CRNKL1Q9BZJ0 848 aaKnown RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 CHIAQ9BZP6 476 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 Q9H3A6 140 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LRRN3Q9H3W5 708 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LRRC40Q9H9A6 602 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 RAB18Q9NP72 206 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 TNFRSF19Q9NS68 423 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 PRR34Q9NV39 138 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 PAK1IP1Q9NWT1 392 aaPredicted RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 COX16Q9P0S2 106 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 WARS2Q9UGM6 360 aaKnown RBP1.99□□□□□ -2.09
CD47-203ENST00000398258 DCDC2Q9UHG0 476 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 MAD1L1Q9Y6D9 718 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 KIF25-AS1Q9Y6Z4 181 aa1.99□□□□□ -2.09
CD47-203ENST00000398258 LRP5LA4QPB2 252 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 F5H6K3 240 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 RIPK2O43353 540 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 CXCL13O43927 109 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 MTX2O75431 263 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 ZNF254O75437 659 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 LRATO95237 230 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 PGK1P00558 417 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 IGHV3-48P01763 117 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 DBTP11182 482 aaKnown RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 RNH1P13489 461 aaKnown RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 POU2F1P14859 743 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 COX5AP20674 150 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 IMPDH1P20839 514 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 UGT1A5P35504 534 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 MAP3K8P41279 467 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 CCT3P49368 545 aaKnown RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 KLRC3Q07444 240 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 KLRB1Q12918 225 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 RIPK1Q13546 671 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 DPYSL2Q16555 572 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 AANATQ16613 207 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 CFAP221Q4G0U5 840 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms