RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 GGHQ92820 318 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PTX4Q96A99 478 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ANKRD9Q96BM1 317 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF391Q9UJN7 358 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SLC6A14Q9UN76 642 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MRPS18CQ9Y3D5 142 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 VSTM2BA6NLU5 285 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 REM1O75628 298 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 AK4P27144 223 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CD82P27701 267 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FBXW4P57775 412 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ROM1Q03395 351 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RPL22L1Q6P5R6 122 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ASB18Q6ZVZ8 466 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FAM109AQ8N4B1 249 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ADAMTS14Q8WXS8 1223 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 UFD1Q92890 307 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CIDECQ96AQ7 238 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 OR52D1Q9H346 318 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 NEK6Q9HC98 313 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 GP6Q9HCN6 339 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FBLN5Q9UBX5 448 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RARRES3Q9UL19 164 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 INTS1Q8N201 2190 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 A8MVM7 634 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 LINC01565O15544 149 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TDGF1P13385 188 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 GRK6P43250 576 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SLC37A1P57057 533 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 GTF3C1Q12789 2109 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZIK1Q3SY52 487 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 POM121L1PQ3SYA9 428 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 LYSMD4Q5XG99 296 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 GDF7Q7Z4P5 450 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZBTB44Q8NCP5 570 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 B3GNT7Q8NFL0 401 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 APH1BQ8WW43 257 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RPL3LQ92901 407 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF501Q96CX3 271 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 NUDT16L1Q9BRJ7 211 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 XKR8Q9H6D3 395 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MOV10Q9HCE1 1003 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 BABAM2Q9NXR7 383 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 QPCTLQ9NXS2 382 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TNFRSF10DQ9UBN6 386 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MOSPD1Q9UJG1 213 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SC5DO75845 299 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 NADKO95544 446 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SBK2P0C263 348 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PSMB5P28074 263 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SOX18P35713 384 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PPP3R1P63098 170 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CYP4F2P78329 520 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SCN1BQ07699 218 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PIN1Q13526 163 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SGCBQ16585 318 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 NKAIN1Q4KMZ8 207 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MRPL2Q5T653 305 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ANKRD26P1Q6NSI1 321 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SLC23A3Q6PIS1 610 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 OPN5Q6U736 354 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MTFMTQ96DP5 389 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TSSK6Q9BXA6 273 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TBC1D17Q9HA65 648 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ACSL6Q9UKU0 697 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ERVK-19Q9WJR5 959 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MAGEB3O15480 346 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 DBTP11182 482 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 HK1P19367 917 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 AQP1P29972 269 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 WASP42768 502 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZP4Q12836 540 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TAB1Q15750 504 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 NEDD8Q15843 81 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 LRRN1Q6UXK5 716 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 OVCH1Q7RTY7 1134 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CCDC190Q86UF4 302 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RAB8BQ92930 207 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 HSPA12BQ96MM6 686 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 DNAJB12Q9NXW2 375 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RPH3AQ9Y2J0 694 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 HDGFL3Q9Y3E1 203 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CLCA3PQ9Y6N3 262 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TP53BP1Q12888 1972 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 SCDO00767 359 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 CSTAP01040 98 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 RPS5P46782 204 aaKnown RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 C17orf67Q0P5P2 114 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 ALG10BQ5I7T1 473 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 C3orf49Q96BT1 292 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 NTNG2Q96CW9 530 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 ZC3HAV1LQ96H79 300 aaKnown RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 PRSS27Q9BQR3 290 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 SLCO5A1Q9H2Y9 848 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 MOB1AQ9H8S9 216 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 U3KQV3 271 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 A0A1B0GWA3 101 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 PRR23D1E9PI22 279 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 HCRTR1O43613 425 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms