RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CYP4B1P13584 511 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 NAGAP17050 411 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CD53P19397 219 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 DRD5P21918 477 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 HOXC12P31275 282 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 PCGF2P35227 344 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OPRM1P35372 400 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 PEX19P40855 299 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 LHX2P50458 406 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ACTR3P61158 418 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ELF3P78545 371 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-202ENST00000396828 HPCAP84074 193 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CDK6Q00534 326 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 MS4A2Q01362 244 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 SCARB2Q14108 478 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 KPNB1Q14974 876 aaKnown RBP9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ADRM1Q16186 407 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 FXNQ16595 210 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CT45A2Q5DJT8 189 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 MTX3Q5HYI7 312 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 FBXW10Q5XX13 1052 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 LCN8Q6JVE9 175 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 SLC30A6Q6NXT4 461 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 C16orf62Q7Z3J2 963 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 C10orf111Q8N326 155 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 HIPK4Q8NE63 616 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OR4N2Q8NGD1 307 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OR5D16Q8NGK9 328 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OR14L1PQ8NHC6 308 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 WDR60Q8WVS4 1066 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 SLC9A6Q92581 669 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 RAB8BQ92930 207 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 FAM162AQ96A26 154 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 GIMAP5Q96F15 307 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 C16orf58Q96GQ5 468 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 NSMCE2Q96MF7 247 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OR7D2Q96RA2 312 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ADOQ96SZ5 270 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 STACQ99469 402 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 RBM24Q9BX46 236 aaKnown RBP9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OR2B2Q9GZK3 357 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 DENND2DQ9H6A0 471 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-202ENST00000396828 GORASP2Q9H8Y8 452 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 FOLH1BQ9HBA9 442 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 KLRF1Q9NZS2 232 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CALML5Q9NZT1 146 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 GMPR2Q9P2T1 348 aaKnown RBP9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CLCF1Q9UBD9 225 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 FOXD3Q9UJU5 478 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-202ENST00000396828 LIPT1Q9Y234 373 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 WIF1Q9Y5W5 379 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 AQP12BA6NM10 295 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 H0Y3Z8 333 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 H0YC42 278 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 TO15178 435 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 ZIC3O60481 467 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 TSPAN2O60636 221 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 CBR3O75828 277 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 TNFSF13O75888 250 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 AK1P00568 194 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 IFNA14P01570 189 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 BCHEP06276 602 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 NUDT7P0C024 238 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 TFPTP0C1Z6 253 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 ARAFP10398 606 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 NR2F1P10589 423 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 NCK1P16333 377 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 PPICP45877 212 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 CRISP3P54108 245 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 GAS1P54826 345 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 TPD52P55327 224 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-202ENST00000396828 CLDN15P56746 228 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 CLDN18P56856 261 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 B3GALT5-AS1P59052 145 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 RPP38P78345 283 aaKnown RBP9.32□□□□□ -0.92
NEDD8-202ENST00000396828 SORDQ00796 357 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 KEAP1Q14145 624 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 REEP3Q6NUK4 255 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 CYP2R1Q6VVX0 501 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 SPATA24Q86W54 205 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 KIF18BQ86Y91 864 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 PTOV1Q86YD1 416 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 PLCZ1Q86YW0 608 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 SLC44A2Q8IWA5 706 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-202ENST00000396828 AQP12AQ8IXF9 295 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 COX18Q8N8Q8 333 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 NFKBIDQ8NI38 313 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 FBXO30Q8TB52 745 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 GPR151Q8TDV0 419 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 MAL2Q969L2 176 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 LRRC46Q96FV0 321 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 RSRC1Q96IZ7 334 aaKnown RBP9.32□□□□□ -0.92
NEDD8-202ENST00000396828 VSTM2LQ96N03 204 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 COL21A1Q96P44 957 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 UCN2Q96RP3 112 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 LMF2Q9BU23 707 aaKnown RBP9.32□□□□□ -0.92
NEDD8-202ENST00000396828 RTN4RQ9BZR6 473 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 PIGUQ9H490 435 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 SERHL2Q9H4I8 314 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms