RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 HSD17B8Q92506 261 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CPNE4Q96A23 557 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 RNF170Q96K19 258 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 NKX3-1Q99801 234 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 NUDT22Q9BRQ3 303 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 THSD1Q9NS62 852 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 AJAP1Q9UKB5 411 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 PSAT1Q9Y617 370 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CEP170BQ9Y4F5 1589 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 C17orf105B2RV13 164 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 F6UZH7 168 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 METTL15P1P0C7V9 234 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 FGF3P11487 239 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 RPL7P18124 248 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 TAGLN2P37802 199 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC11A1P49279 550 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PGGT1BP53609 377 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 MLF1P58340 268 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 OR8B8Q15620 311 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 KCNJ8Q15842 424 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ADIRFQ15847 76 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 C4orf17Q53FE4 359 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 C6orf132Q5T0Z8 1188 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 TMEM217Q8N7C4 229 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 NANPQ8TBE9 248 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ELP4Q96EB1 424 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 POPDC3Q9HBV1 291 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 GAB2Q9UQC2 676 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PTRH2Q9Y3E5 179 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 V9GY05 133 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 DIP2AQ14689 1571 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 KRBOX1C9JBD0 128 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ATP6V1G2-DDX39BF2Z307 99 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 COCHO43405 550 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 UBL4AP11441 157 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CCL5P13501 91 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CXCR4P61073 352 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC25A11Q02978 314 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 NFATC3Q12968 1075 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 C18orf21Q32NC0 220 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 CLVS2Q5SYC1 327 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PIP5KL1Q5T9C9 394 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SPRYD7Q5W111 196 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 C18orf63Q68DL7 685 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 TIFABQ6ZNK6 161 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SSX9Q7RTT3 188 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SCCPDHQ8NBX0 429 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 MUCL1Q96DR8 90 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC45A3Q96JT2 553 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ALOXE3Q9BYJ1 711 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 TPSD1Q9BZJ3 242 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SPHK2Q9NRA0 654 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 BABAM2Q9NXR7 383 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 RIMS3Q9UJD0 308 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SSUH2Q9Y2M2 353 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 V9GYS6 101 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ZNF816-ZNF321PA0A0X1KG74 233 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 FAM189A1O60320 539 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PRAF2O60831 178 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CD1DP15813 335 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 NFYAP23511 347 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 HOXA11P31270 313 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC7A9P82251 487 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 IKZF1Q13422 519 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 IGDCC3Q8IVU1 814 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 MFSD6LQ8IWD5 586 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ZNF321PQ8N8H1 164 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 GIMAP1Q8WWP7 306 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 RAB7BQ96AH8 199 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC2A13Q96QE2 648 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ARNT2Q9HBZ2 717 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 DECR2Q9NUI1 292 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 NCR1O76036 304 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 HBQ1P09105 142 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 HNF1AP20823 631 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 CDKN2DP55273 166 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 LGALS4P56470 323 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 HTRA4P83105 476 aaPredicted RBP5.51□□□□□ -1.53
RFX3-204ENST00000382004 GK3PQ14409 553 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 MICAQ29983 383 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 TSPYL5Q86VY4 417 aaPredicted RBP5.51□□□□□ -1.53
RFX3-204ENST00000382004 TMEM139Q8IV31 216 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 BPIFB2Q8N4F0 458 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 OR52H1Q8NGJ2 320 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 OR11L1Q8NGX0 322 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 URGCP-MRPS24S4R325 110 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 COL5A2P05997 1499 aaPredicted RBP5.51□□□□□ -1.53
RFX3-204ENST00000382004 SLC22A23A1A5C7 686 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 SGK494L7N484 410 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 SDHDO14521 159 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 THBS1P07996 1170 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 MAOBP27338 520 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 ATP1B3P54709 279 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 EMP2P54851 167 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 RBPJQ06330 500 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 LTBQ06643 244 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 UNC50Q53HI1 259 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 TECRLQ5HYJ1 363 aa5.51□□□□□ -1.53
RFX3-204ENST00000382004 FAM26DQ5JW98 314 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms