RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 REG4Q9BYZ8 158 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 TRIM2Q9C040 744 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 HEXA-AS1Q9H8Q6 139 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 MED17Q9NVC6 651 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 PLEKHM1Q9Y4G2 1056 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 C2orf92A0A1B0GVN3 265 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 HMSDA8MTL9 139 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 OR1I1O60431 355 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 RPN2P04844 631 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 FAM110CQ1W6H9 321 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CARD16Q5EG05 197 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 SIRPB2Q5JXA9 342 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 SLC36A4Q6YBV0 504 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 TMPRSS7Q7RTY8 843 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 GPR135Q8IZ08 494 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 GNPDA2Q8TDQ7 276 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 RELTQ969Z4 430 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 MSLNLQ96KJ4 702 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF583Q96ND8 569 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 BARHL1Q9BZE3 327 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 GDE1Q9NZC3 331 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 GALPQ9UBC7 116 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CYP8B1Q9UNU6 501 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ARL5AQ9Y689 179 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 WNT9AO14904 365 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 SOX14O95416 240 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 UBE2KP61086 200 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 ZDHHC20Q5W0Z9 365 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 CSGALNACT1Q8TDX6 532 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 HMGB4Q8WW32 186 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 SORCS1Q8WY21 1168 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 ANGPT4Q9Y264 503 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 A0A1B0GUH1 482 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 TMEM238LA0A1B0GVL6 79 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 DPM1O60762 260 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 CSO75390 466 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 CD82P27701 267 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 GSG1Q2KHT4 349 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 ENPP7Q6UWV6 458 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 FAM26EQ8N5C1 309 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF548Q8NEK5 533 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 PCDHGC4Q9Y5F7 938 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 NPIPB9F8W1W9 429 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 HAS3O00219 553 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 OR2F2O95006 317 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 HPP00738 406 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 EDN1P05305 212 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 MAKP20794 623 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 SELENOPP49908 381 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 RPS14P62263 151 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 SH3BP2P78314 561 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 OR2F1Q13607 317 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 XKR6Q5GH73 641 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 TMEM179BQ7Z7N9 219 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 SIDT2Q8NBJ9 832 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 HJURPQ8NCD3 748 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 S100A16Q96FQ6 103 aaKnown RBP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 FUBP3Q96I24 572 aaKnown RBP eCLIP11.03□□□□□ -0.64
NPHP4-202ENST00000378161 PITX2Q99697 317 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 CIPCQ9C0C6 399 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 DERL2Q9GZP9 239 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 UQCC1Q9NVA1 299 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 KLHL28Q9NXS3 571 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 PADI3Q9ULW8 664 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 RASD1Q9Y272 281 aa11.03□□□□□ -0.64
NPHP4-202ENST00000378161 C13orf42A0A1B0GVH6 325 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 A0A1W2PPH5 198 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 OR5H15A6NDH6 313 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 OR5H1A6NKK0 313 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 NPIPA2E9PIF3 369 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 NPC1O15118 1278 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 PRSS23O95084 383 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.64
NPHP4-202ENST00000378161 ELK1P19419 428 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 PRKAG1P54619 331 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 RPS25P62851 125 aaKnown RBP11.02□□□□□ -0.64
NPHP4-202ENST00000378161 SSPNQ14714 243 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 ACSM5Q6NUN0 579 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 UNQ6126/PRO20091Q6UXV3 157 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 APOOLQ6UXV4 268 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 POPDC3Q9HBV1 291 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 GPATCH2Q9NW75 528 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.64
NPHP4-202ENST00000378161 UPK1AO00322 258 aa11.02□□□□□ -0.65
NPHP4-202ENST00000378161 ARNTLO00327 626 aa11.02□□□□□ -0.65
NPHP4-202ENST00000378161 C6orf47O95873 294 aa11.02□□□□□ -0.65
NPHP4-202ENST00000378161 GDNFP39905 211 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms