RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 WIPF3A6NGB9 483 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 CD8B2A6NJW9 211 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 CCT8L1PA6NM43 557 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SHISA8B8ZZ34 492 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SYT5O00445 386 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 NME4O00746 187 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 IFNA14P01570 189 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 CALB2P22676 271 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 CPA2P48052 419 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 IDH2P48735 452 aaKnown RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SRSF1Q07955 248 aaKnown RBP eCLIP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SELENBP1Q13228 472 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 ACSF3Q4G176 576 aaPredicted RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 RTL6Q6ICC9 239 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 C16orf89Q6UX73 402 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 GRINAQ7Z429 371 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 LACC1Q8IV20 430 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 PGAM4Q8N0Y7 254 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 ALG2Q9H553 416 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SERINC1Q9NRX5 453 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 PAQR5Q9NXK6 330 aaPredicted RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 TMEM181Q9P2C4 612 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 FAM215AQ9Y5M1 114 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 FASNP49327 2511 aaKnown RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 ADAM11O75078 769 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 LDLRP01130 860 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SLC1A3P43003 542 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 MAP2K6P52564 334 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SMSP52788 366 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 RPS3AP61247 264 aaKnown RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 COPZ1P61923 177 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SRYQ05066 204 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 DMTNQ08495 405 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 PDSS1Q5T2R2 415 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 NSUN5P2Q63ZY6 315 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 ESPNLQ6ZVH7 1005 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 PLEKHM3Q6ZWE6 761 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 CHMP1BQ7LBR1 199 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 TRPM8Q7Z2W7 1104 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 ADGRE4PQ86SQ3 457 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SSC4DQ8WTU2 575 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 CCDC120Q96HB5 630 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 NPAS1Q99742 590 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 TTYH2Q9BSA4 534 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 SPIN1Q9Y657 262 aaPredicted RBP11.94□□□□□ -0.5
CKAP2-202ENST00000378034 TENM4Q6N022 2769 aa11.94□□□□□ -0.5
CKAP2-202ENST00000378034 FLNCQ14315 2725 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 AP3D1O14617 1153 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 GKN3PP0CG01 181 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 AGAP20933 346 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 KCNJ5P48544 419 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 MXRA7P84157 204 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 MERTKQ12866 999 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 SPATS1Q496A3 300 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 WBP2NLQ6ICG8 309 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 C3orf33Q6P1S2 294 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 C3P1Q6ZMU1 363 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 GGNQ86UU5 652 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 SLC25A43Q8WUT9 341 aaPredicted RBP11.93□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF524Q96C55 264 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
CKAP2-202ENST00000378034 ADAMDEC1O15204 470 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 EFNA2O43921 213 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TPST1O60507 370 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 LGI1O95970 557 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 GLI4P10075 376 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TIMP3P35625 211 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 GSK3BP49841 420 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
CKAP2-202ENST00000378034 SUCLG1P53597 346 aaKnown RBP11.92□□□□□ -0.5
CKAP2-202ENST00000378034 CLDN15P56746 228 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 CLDN20P56880 219 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 UBQLNLQ8IYU4 475 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 MARVELD2Q8N4S9 558 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 SMPDL3BQ92485 455 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 RND1Q92730 232 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TAMM41Q96BW9 452 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 KLHL15Q96M94 604 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TRIB1Q96RU8 372 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 KCTD14Q9BQ13 255 aaPredicted RBP11.92□□□□□ -0.5
CKAP2-202ENST00000378034 RSPO3Q9BXY4 272 aaPredicted RBP11.92□□□□□ -0.5
CKAP2-202ENST00000378034 ADAM19Q9H013 955 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 ADA2Q9NZK5 511 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TESQ9UGI8 421 aaKnown RBP11.92□□□□□ -0.5
CKAP2-202ENST00000378034 BAG5Q9UL15 447 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 USP22Q9UPT9 525 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 ARHGAP21Q5T5U3 1957 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 CLCA1A8K7I4 914 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 GSTA4O15217 222 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 SEC14L5O43304 696 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 KDELR2P33947 212 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 CLK1P49759 484 aaKnown RBP11.92□□□□□ -0.5
CKAP2-202ENST00000378034 NUP107P57740 925 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 PMPCAQ10713 525 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 DUSP7Q16829 419 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms