RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 MRPL15Q9P015 296 aaKnown RBP10.28□□□□□ -0.76
MDC1-201ENST00000376406 MRPS2Q9Y399 296 aaKnown RBP10.28□□□□□ -0.76
MDC1-201ENST00000376406 CYB5BO43169 146 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 MMP12P39900 470 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 DNAAF1Q8NEP3 725 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 OR2A12Q8NGT7 310 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 UBQLN4Q9NRR5 601 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 NAALAD2Q9Y3Q0 740 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 SCN3AQ9NY46 2000 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 J3KTA2 159 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 GCH1P30793 250 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 LANCL3Q6ZV70 420 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 TRIM43Q96BQ3 446 aaPredicted RBP10.27□□□□□ -0.76
MDC1-201ENST00000376406 A4GALTQ9NPC4 353 aa10.27□□□□□ -0.76
MDC1-201ENST00000376406 IL1AP01583 271 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 CTBSQ01459 385 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 EIF2B1Q14232 305 aaKnown RBP10.27□□□□□ -0.77
MDC1-201ENST00000376406 C14orf28Q4W4Y0 310 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 METTL11BQ5VVY1 283 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 PIWIL3Q7Z3Z3 882 aaKnown RBP10.27□□□□□ -0.77
MDC1-201ENST00000376406 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 BPIFA2Q96DR5 249 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 PCP4L1A6NKN8 68 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 M0R129 80 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 PEX14O75381 377 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 CAPNS1P04632 268 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 CSF1P09603 554 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 HTR2BP41595 481 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 SLC6A11P48066 632 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 SSR4P51571 173 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 UBE2NLQ5JXB2 153 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 LILRA2Q8N149 483 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 PARP16Q8N5Y8 322 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 DNAJA3Q96EY1 480 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 HCAR1Q9BXC0 346 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 TESQ9UGI8 421 aaKnown RBP10.27□□□□□ -0.77
MDC1-201ENST00000376406 GOSR2O14653 212 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 EGFP01133 1207 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 SFTPBP07988 381 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 CPMP14384 443 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 CD34P28906 385 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 SLC5A12Q1EHB4 618 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 LRRC37A5PQ49AS3 106 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 GPR139Q6DWJ6 353 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 CCSAPQ6IQ19 270 aaPredicted RBP10.27□□□□□ -0.77
MDC1-201ENST00000376406 SBSNQ6UWP8 590 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 ZNF767PQ75MW2 155 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 ZNF417Q8TAU3 575 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 C7orf50Q9BRJ6 194 aaKnown RBP10.27□□□□□ -0.77
MDC1-201ENST00000376406 ZNF700Q9H0M5 742 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 MEGF11A6BM72 1044 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 WDPCPO95876 746 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 POU3F2P20265 443 aaPredicted RBP10.27□□□□□ -0.77
MDC1-201ENST00000376406 PDE7AQ13946 482 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 OR1Q1Q15612 314 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 TP53I3Q53FA7 332 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 GSG1LQ6UXU4 331 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 GALNT11Q8NCW6 608 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 SYT4Q9H2B2 425 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 MED17Q9NVC6 651 aa10.27□□□□□ -0.77
MDC1-201ENST00000376406 TRBV11-1A0A0K0K1C0 115 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 FURINP09958 794 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 FUT1P19526 365 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 IMPA1P29218 277 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 S100A7P31151 101 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 NR0B1P51843 470 aaKnown RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 RPE65Q16518 533 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 PGGHGQ32M88 737 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 FAM198BQ6UWH4 519 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 VRK2Q86Y07 508 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 PHC2Q8IXK0 858 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 DNAJC22Q8N4W6 341 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 DEDD2Q8WXF8 326 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 KLHL13Q9P2N7 655 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 COL11A2P13942 1736 aaPredicted RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 KLRC4-KLRK1H3BQV0 150 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 LDB3O75112 727 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 GASTP01350 101 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 EIF1P41567 113 aaKnown RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 MRPS10P82664 201 aaKnown RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 DEFB110Q30KQ9 67 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 C3orf33Q6P1S2 294 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 ZNF704Q6ZNC4 412 aaPredicted RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 RNF113BQ8IZP6 322 aaKnown RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 ZNF583Q96ND8 569 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 THAP7Q9BT49 309 aaPredicted RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 IER3IP1Q9Y5U9 82 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 TRBV4-1A0A0J9YWV2 114 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 HPGDSO60760 199 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 PRAF2O60831 178 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 SLCO2B1O94956 709 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 DND1Q8IYX4 353 aaKnown RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 OR6C1Q96RD1 312 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 DDX31Q9H8H2 851 aaKnown RBP10.26□□□□□ -0.77
MDC1-201ENST00000376406 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 CEP290O15078 2479 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 RDH16O75452 317 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 UGT2B7P16662 529 aa10.26□□□□□ -0.77
MDC1-201ENST00000376406 RAB38P57729 211 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms