RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 YARS2Q9Y2Z4 477 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 KNL1Q8NG31 2342 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 FAM157BP0CG42 384 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 NID1P14543 1247 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 PSMA1P25786 263 aaKnown RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 HTR2AP28223 471 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 MAP2K3P46734 347 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 MLLT11Q13015 90 aaPredicted RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 ZC3H14Q6PJT7 736 aaKnown RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 ARHGEF39Q8N4T4 335 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 C19orf47Q8N9M1 422 aaKnown RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 GALNT6Q8NCL4 622 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 GALNT11Q8NCW6 608 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 OR52R1Q8NGF1 315 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 LMAN1LQ9HAT1 526 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 FGF20Q9NP95 211 aaPredicted RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 SEC14L4Q9UDX3 406 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 A0A0A6YYC8 382 aaPredicted RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 IQCMA0A1B0GVH7 501 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 TRAPPC13A5PLN9 417 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 KDM4EB2RXH2 506 aaPredicted RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 I3L1I5 382 aaPredicted RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 SURF4O15260 269 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 CBX7O95931 251 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 SLC35E2P0CK97 266 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 MYL12AP19105 171 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 MTNR1AP48039 350 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 PER3P56645 1201 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 RRAS2P62070 204 aaPredicted RBP12.93□□□□□ -0.34
MSH5-202ENST00000375740 RAB40BQ12829 278 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 OR1Q1Q15612 314 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 SHFQ7M4L6 423 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 PHC2Q8IXK0 858 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 SYT14Q8NB59 555 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 TSTD1Q8NFU3 115 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 B3GAT2Q9NPZ5 323 aa12.93□□□□□ -0.34
MSH5-202ENST00000375740 CDHR4A6H8M9 788 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 LINC00862A6NCI5 91 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 PCP4L1A6NKN8 68 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 GTPBP1O00178 669 aaKnown RBP12.92□□□□□ -0.34
MSH5-202ENST00000375740 MBTPS2O43462 519 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 OR10H2O60403 315 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ARSBP15848 533 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 GAS6Q14393 721 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 MINDY4Q4G0A6 757 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 C3orf38Q5JPI3 329 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 OR2G6Q5TZ20 316 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 C22orf42Q6IC83 251 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 WDR88Q6ZMY6 472 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ZNF620Q6ZNG0 422 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 SLC25A46Q96AG3 418 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 SAMD8Q96LT4 415 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 NDUFB11Q9NX14 153 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 HCN3Q9P1Z3 774 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ELF5Q9UKW6 265 aaPredicted RBP12.92□□□□□ -0.34
MSH5-202ENST00000375740 STUB1Q9UNE7 303 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 U3KQ87 197 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 IGHV1OR15-9A0A0B4J2B8 117 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 BRINP1O60477 761 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 WNT1P04628 370 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 PRKACAP17612 351 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 RFX3P48380 749 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ZNF155Q12901 538 aaPredicted RBP12.92□□□□□ -0.34
MSH5-202ENST00000375740 MAB21L1Q13394 359 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 GDPGP1Q6ZNW5 385 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ARL14Q8N4G2 192 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 GDPD1Q8N9F7 314 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ARSGQ96EG1 525 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 GON4LQ3T8J9 2241 aa12.92□□□□□ -0.34
MSH5-202ENST00000375740 FAM240BA0A1B0GVZ2 78 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 NKX2-2O95096 273 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 LYPD3O95274 346 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SLC2A10O95528 541 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SRFP11831 508 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 FUT1P19526 365 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SDC2P34741 201 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 AGFG1P52594 562 aaKnown RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 PRTGQ2VWP7 1150 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 PGGHGQ32M88 737 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 LCN1P1Q5VSP4 162 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 AADACL4Q5VUY2 407 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 CDH24Q86UP0 819 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 GATAD2BQ8WXI9 593 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 MAP3K3Q99759 626 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 C1QTNF6Q9BXI9 259 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 TEX12Q9BXU0 123 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 RBFOX1Q9NWB1 397 aaKnown RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 TXNL4BQ9NX01 149 aaKnown RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 ZNF223Q9UK11 482 aaPredicted RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 CDH10Q9Y6N8 788 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 IRGMA1A4Y4 181 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms