RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KPNA4O00629 521 aaPredicted RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 TERTO14746 1132 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 TM4SF5O14894 197 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 ITGA10O75578 1167 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 CELA2AP08217 269 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 PTNP21246 168 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 ITPKBP27987 946 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 RPL5P46777 297 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 P2RX1P51575 399 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 SMSP52788 366 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 CDH15P55291 814 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 C17orf67Q0P5P2 114 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 CBFBQ13951 182 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 NTRK2Q16620 822 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 C12orf73Q69YU5 71 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 TRUB1Q8WWH5 349 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 PHOX2BQ99453 314 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 MEPEQ9NQ76 525 aaPredicted RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 C20orf141Q9NUB4 165 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 TPRKBQ9Y3C4 175 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 RIF1Q5UIP0 2472 aaKnown RBP24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 DPPA5A6NC42 116 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 A6NHS1 94 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 WBP4O75554 376 aaKnown RBP24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 RBMS1P29558 406 aaKnown RBP24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 FMO3P31513 532 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 NR1H2P55055 460 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 CDK5Q00535 292 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 GINS1Q14691 196 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 SLC27A4Q6P1M0 643 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 PTCHD4Q6ZW05 846 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 DUSP19Q8WTR2 217 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 RNF138Q8WVD3 245 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 DPH1Q9BZG8 443 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 SLC19A3Q9BZV2 496 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 DSN1Q9H410 356 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 EGLN3Q9H6Z9 239 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 C12orf10Q9HB07 376 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF226Q9NYT6 803 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 AASSQ9UDR5 926 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 FBXL4Q9UKA2 621 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 EXPH5Q8NEV8 1989 aa24.02■■□□□ 1.44
ATPAF1-202ENST00000371937 UNC119BA6NIH7 251 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 ELOA3DA6NLF2 546 aaPredicted RBP24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 CDC42EP2O14613 210 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 NUDT14O95848 222 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 ELOA3BQ3SY89 546 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 OPN5Q6U736 354 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 ZNF620Q6ZNG0 422 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 GALNT15Q8N3T1 639 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 ELOA3Q8NG57 546 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 B4GALNT2Q8NHY0 566 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 APH1BQ8WW43 257 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 SLC25A19Q9HC21 320 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 CDH10Q9Y6N8 788 aa24.01■■□□□ 1.43
ATPAF1-202ENST00000371937 HTR3EA5X5Y0 456 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 TRIM64CA6NLI5 447 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 TFAP2AP05549 437 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 GABRB1P18505 474 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 MAKP20794 623 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 F8A1P23610 371 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 ASCL5Q7RTU5 278 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 ATG4DQ86TL0 474 aaPredicted RBP24■■□□□ 1.43
ATPAF1-202ENST00000371937 RAB43Q86YS6 212 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 ARMC10Q8N2F6 343 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 TEX12Q9BXU0 123 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 PLA2G12AQ9BZM1 189 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 ATP13A2Q9NQ11 1180 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 P4HTMQ9NXG6 502 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 LOC101059948A0A1B0GTJ6 334 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24■■□□□ 1.43
ATPAF1-202ENST00000371937 TP53I11O14683 189 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 NOVA1P51513 510 aaKnown RBP24■■□□□ 1.43
ATPAF1-202ENST00000371937 ZNF791Q3KP31 576 aaPredicted RBP24■■□□□ 1.43
ATPAF1-202ENST00000371937 RPL13AP3Q6NVV1 102 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 RPS19BP1Q86WX3 136 aaKnown RBP24■■□□□ 1.43
ATPAF1-202ENST00000371937 DND1Q8IYX4 353 aaKnown RBP24■■□□□ 1.43
ATPAF1-202ENST00000371937 PRRG3Q9BZD7 231 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 ADAM19Q9H013 955 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 HHATLQ9HCP6 504 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 SDHAF3Q9NRP4 125 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 KLRF1Q9NZS2 232 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 CFAP54Q96N23 3096 aa24■■□□□ 1.43
ATPAF1-202ENST00000371937 EFCAB9A8MZ26 197 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 ADAM10O14672 748 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 SAGP10523 405 aaPredicted RBP23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 SOX3P41225 446 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 SNRPGP62308 76 aaKnown RBP23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 CRYZQ08257 329 aaKnown RBP23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 ZNF773Q6PK81 442 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 MRGPREQ86SM8 312 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 OR10G3Q8NGC4 313 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 OR8J1Q8NGP2 316 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 CDCP1Q9H5V8 836 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 METTL7AQ9H8H3 244 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 TBC1D23Q9NUY8 699 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 AHCTF1Q8WYP5 2266 aa23.99■■□□□ 1.43
ATPAF1-202ENST00000371937 GNB5O14775 395 aa23.98■■□□□ 1.43
ATPAF1-202ENST00000371937 XPNPEP2O43895 674 aa23.98■■□□□ 1.43
ATPAF1-202ENST00000371937 CDC40O60508 579 aaKnown RBP eCLIP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms