RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CALHM2Q9HA72 323 aa13.16□□□□□ -0.3
SF3B5-201ENST00000367569 LEF1Q9UJU2 399 aaPredicted RBP13.16□□□□□ -0.3
SF3B5-201ENST00000367569 ZNF443Q9Y2A4 671 aaPredicted RBP13.16□□□□□ -0.3
SF3B5-201ENST00000367569 AP4B1Q9Y6B7 739 aa13.16□□□□□ -0.3
SF3B5-201ENST00000367569 MAP1AP78559 2803 aaPredicted RBP13.16□□□□□ -0.3
SF3B5-201ENST00000367569 DSPPQ9NZW4 1301 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 NF1P21359 2839 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 C7orf72A4D263 438 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 FBP2O00757 339 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 DVL2O14641 736 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 ATP8B1O43520 1251 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 IL7RP16871 459 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 DNAJA1P31689 397 aaKnown RBP13.15□□□□□ -0.3
SF3B5-201ENST00000367569 TIMP3P35625 211 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 CPOXP36551 454 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 CRISP3P54108 245 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 KCNJ10P78508 379 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 MERTKQ12866 999 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 KLF10Q13118 480 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 SLC25A35Q3KQZ1 300 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 GLYR1Q49A26 553 aaPredicted RBP13.15□□□□□ -0.3
SF3B5-201ENST00000367569 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 SNX32Q86XE0 403 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 METTL25Q8N6Q8 603 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 POU5F2Q8N7G0 328 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 OR52P1PQ8NH57 321 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 OR2V1Q8NHB1 315 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 ADGRG7Q96K78 797 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 KLHL15Q96M94 604 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 ZNF317Q96PQ6 595 aaPredicted RBP13.15□□□□□ -0.3
SF3B5-201ENST00000367569 PIF1Q9H611 641 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 COQ10BQ9H8M1 238 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 SAR1AQ9NR31 198 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
SF3B5-201ENST00000367569 KLHL14Q9P2G3 628 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 SLC35A3Q9Y2D2 325 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 NDUFAF1Q9Y375 327 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 MPDZO75970 2070 aa13.15□□□□□ -0.3
SF3B5-201ENST00000367569 PRRC2AP48634 2157 aaKnown RBP13.15□□□□□ -0.3
SF3B5-201ENST00000367569 VPS13CQ709C8 3753 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 C5orf58C9J3I9 102 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 SMNDC1O75940 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
SF3B5-201ENST00000367569 DBIP07108 87 aaKnown RBP13.14□□□□□ -0.31
SF3B5-201ENST00000367569 PRG2P13727 222 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 PGCP20142 388 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 CTSSP25774 331 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 ART1P52961 327 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 SESN3P58005 492 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 RPS3AP61247 264 aaKnown RBP13.14□□□□□ -0.31
SF3B5-201ENST00000367569 HOXC5Q00444 222 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 SF3B4Q15427 424 aaKnown RBP eCLIP13.14□□□□□ -0.31
SF3B5-201ENST00000367569 BCL2A1Q16548 175 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 TMEM176BQ3YBM2 270 aaPredicted RBP13.14□□□□□ -0.31
SF3B5-201ENST00000367569 REP15Q6BDI9 236 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 PEX5LQ8IYB4 626 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 ROBO4Q8WZ75 1007 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 WNT2BQ93097 391 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 TM9SF2Q99805 663 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 PRRG4Q9BZD6 226 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 SLC24A3Q9HC58 644 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 A4GALTQ9NPC4 353 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 CTPS2Q9NRF8 586 aa13.14□□□□□ -0.31
SF3B5-201ENST00000367569 GPC6Q9Y625 555 aaPredicted RBP13.14□□□□□ -0.31
SF3B5-201ENST00000367569 A0A1W2PNV4 684 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 TMEM247A6NEH6 219 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 LINC01387J3KSC0 135 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 NTN1O95631 604 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 ARAFP10398 606 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 NID1P14543 1247 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 ELK4P28324 431 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 SLC7A1P30825 629 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 EIF1P41567 113 aaKnown RBP13.13□□□□□ -0.31
SF3B5-201ENST00000367569 IDH2P48735 452 aaKnown RBP13.13□□□□□ -0.31
SF3B5-201ENST00000367569 ASCL1P50553 236 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 RAC1P63000 192 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 TXNL4AP83876 142 aaKnown RBP13.13□□□□□ -0.31
SF3B5-201ENST00000367569 FADDQ13158 208 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 SELENBP1Q13228 472 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 CYP51A1Q16850 503 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 LIN52Q52LA3 116 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 PLEKHM3Q6ZWE6 761 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 ZZZ3Q8IYH5 903 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 CLIP4Q8N3C7 705 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 MRGPRX4Q96LA9 322 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 OR5B2Q96R09 309 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 CGREF1Q99674 301 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
SF3B5-201ENST00000367569 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
SF3B5-201ENST00000367569 USP22Q9UPT9 525 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
SF3B5-201ENST00000367569 HRNRQ86YZ3 2850 aaPredicted RBP13.13□□□□□ -0.31
SF3B5-201ENST00000367569 ACANP16112 2415 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms