RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PCTPQ9UKL6 214 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ICAM5Q9UMF0 924 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 WBP11Q9Y2W2 641 aaKnown RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 PPIAL4AQ9Y536 164 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 IGKV3D-15A0A087WSY6 115 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 IGHV1-18A0A0C4DH31 117 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 FAM159BA6NKW6 160 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 KLF11O14901 512 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 COQ9O75208 318 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ALX3O95076 343 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 MSMBP08118 114 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ACP2P11117 423 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 PRKCAP17252 672 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ELK4P28324 431 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 GP5P40197 560 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ARL1P40616 181 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 PPOXP50336 477 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 CCNG1P51959 295 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 NCBP2P52298 156 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ARL4CP56559 192 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 IFT88Q13099 833 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC29A2Q14542 456 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 EFNB3Q15768 340 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 MSMPQ1L6U9 139 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 CCNJQ5T5M9 372 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 TTC19Q6DKK2 380 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ABLIM2Q6H8Q1 611 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 FAHD2BQ6P2I3 314 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 C1QL4Q86Z23 238 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 PTGR2Q8N8N7 351 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 B4GALNT2Q8NHY0 566 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 RHEBL1Q8TAI7 183 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 C22orf15Q8WYQ4 148 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ELP4Q96EB1 424 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 OTUB1Q96FW1 271 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 FAHD2AQ96GK7 314 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 APIPQ96GX9 242 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 DUX5Q96PT3 197 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 DOK1Q99704 481 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 CPNE1Q99829 537 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 TMPRSS13Q9BYE2 586 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 GLIPR2Q9H4G4 154 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 EQTNQ9NQ60 294 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ACSS1Q9NUB1 689 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 ASB6Q9NWX5 421 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 SENP1Q9P0U3 644 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 MALT1Q9UDY8 824 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 PTGDR2Q9Y5Y4 395 aa7.34□□□□□ -1.23
HMGB1P39-201ENST00000366304 TENM3Q9P273 2699 aa7.34□□□□□ -1.24
HMGB1P39-201ENST00000366304 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 TCRBV9S1A1TA0A576 114 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 A6NHS1 94 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 B9A039 149 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 PCDH7O60245 1069 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 KCNK2O95069 426 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 NKX2-2O95096 273 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 SNUPNO95149 360 aaKnown RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 NUDT17P0C025 328 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 GAAP10253 952 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 IFNGR1P15260 489 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 CALCRP30988 508 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 MPIP34949 423 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 EIF1P41567 113 aaKnown RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 HTR6P50406 440 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 LMO4P61968 165 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 HGFACQ04756 655 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 FOXL1Q12952 345 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 GGTA1PQ4G0N0 100 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 HIKESHIQ53FT3 197 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 ELFN2Q5R3F8 820 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 SHQ1Q6PI26 577 aaKnown RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 VHLLQ6RSH7 139 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 RAPH1Q70E73 1250 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 MYPOPQ86VE0 399 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZBED8Q8IZ13 594 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDK20Q8IZL9 346 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 TRIM58Q8NG06 486 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 GPR151Q8TDV0 419 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 GPR119Q8TDV5 335 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 GRK7Q8WTQ7 553 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 SELENOMQ8WWX9 145 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 DVL3Q92997 716 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 APH1AQ96BI3 265 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 LRRC58Q96CX6 371 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 DNAJA3Q96EY1 480 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 GIMAP5Q96F15 307 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 AMDHD1Q96NU7 426 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 BBS4Q96RK4 519 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 EBPLQ9BY08 206 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 ACPTQ9BZG2 426 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 QRSL1Q9H0R6 528 aaKnown RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 ELOVL6Q9H5J4 265 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 NSMCE4AQ9NXX6 385 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 TAS2R16Q9NYV7 291 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 PDP1Q9P0J1 537 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 TRIM33Q9UPN9 1127 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 CARD8Q9Y2G2 431 aa7.33□□□□□ -1.24
HMGB1P39-201ENST00000366304 SH3PXD2BA1X283 911 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 SYCE1LA8MT33 242 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms