RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 URM1Q9BTM9 101 aaKnown RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 NELFAQ9H3P2 528 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SDHAP31040 664 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CCR7P32248 378 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PSMB10P40306 273 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TAZQ16635 292 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TP53INP2Q8IXH6 220 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 OR4F15Q8NGB8 312 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 UBTD2Q8WUN7 234 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 RBM18Q96H35 190 aaKnown RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SYT17Q9BSW7 474 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ACPTQ9BZG2 426 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 NMNAT2Q9BZQ4 307 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 RNF32Q9H0A6 362 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SEMA4GQ9NTN9 838 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF629Q9UEG4 869 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PMS2P2O95744 297 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CCKBRP32239 447 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CLDN6P56747 220 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 HOXC5Q00444 222 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 AMZ1Q400G9 498 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 UNQ6126/PRO20091Q6UXV3 157 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SGK3Q96BR1 496 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 MED17Q9NVC6 651 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM14AQ9Y6G1 99 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TSPAN11A1L157 253 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CPED1A4D0V7 1026 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 M0QYG6 137 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 FZD9O00144 591 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CPN1P15169 458 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CTRB1P17538 263 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CTRB2Q6GPI1 263 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ZMYND19Q96E35 227 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 C16orf58Q96GQ5 468 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 IER3IP1Q9Y5U9 82 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 HEBP2Q9Y5Z4 205 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ZFP37Q9Y6Q3 630 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 FXYD1O00168 92 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 UGDHO60701 494 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 DPPA4Q7L190 304 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 NDUFAF7Q7L592 441 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CMKLR1Q99788 373 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 RRAGCQ9HB90 399 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CPNE7Q9UBL6 633 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 WDR81Q562E7 1941 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 MSCO60682 206 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PPP1R3DO95685 299 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CLDN10P78369 228 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 HTD2P86397 168 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SLC9A3R2Q15599 337 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF384Q8TF68 577 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 OR5P2Q8WZ92 322 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 C1GALT1Q9NS00 363 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SLCO3A1Q9UIG8 710 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 GABRR3A8MPY1 467 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 MPC1LP0DKB6 136 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PRDX3P30048 256 aaKnown RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PSMD8P48556 350 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 RPE65Q16518 533 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 FAM111BQ6SJ93 734 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TMIGD1Q6UXZ0 262 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SERPINA12Q8IW75 414 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 UMODL1-AS1Q8N2C9 162 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 OR4D10Q8NGI6 311 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 MIB2Q96AX9 1013 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 APIPQ96GX9 242 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 WRAP53Q9BUR4 548 aaKnown RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 GAR1Q9NY12 217 aaKnown RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ETV7Q9Y603 341 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 LTN1O94822 1766 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PARP4Q9UKK3 1724 aaKnown RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 M0R3H8 397 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF593O00488 134 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 CBLP22681 906 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TAS2R38P59533 333 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 FAM71CQ8NEG0 241 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 GPR148Q8TDV2 347 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 GAL3ST4Q96RP7 486 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 EVA1BQ9NVM1 165 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 SYN3O14994 580 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RGS11O94810 467 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 THBS1P07996 1170 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PREPP48147 710 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 NKX3-2P78367 333 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZMAT1Q5H9K5 638 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 NBPF12Q5TAG4 269 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 NLGN4YQ8NFZ3 816 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SUSD6Q92537 303 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM19Q96HH6 336 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PRRC1Q96M27 445 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SLC6A14Q9UN76 642 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RAD1O60671 282 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 KNG1P01042 644 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SFTA3P0C7M3 94 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 HAPLN1P10915 354 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 HSD11B1P28845 292 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 IL12BP29460 328 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CRYBB1P53674 252 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 TLE3Q04726 772 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms