RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NPTX1Q15818 432 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 WBP2NLQ6ICG8 309 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 PLEKHM3Q6ZWE6 761 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 ZNF771Q7L3S4 317 aaPredicted RBP13.81□□□□□ -0.2
TPM1-206ENST00000358278 SIAH3Q8IW03 269 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 RSRC1Q96IZ7 334 aaKnown RBP13.81□□□□□ -0.2
TPM1-206ENST00000358278 MRGPRX4Q96LA9 322 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 SFXN2Q96NB2 322 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 PIGQQ9BRB3 760 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 PRR14Q9BWN1 585 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 TRIM2Q9C040 744 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 TMEM27Q9HBJ8 222 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 ACKR4Q9NPB9 350 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 CTPS2Q9NRF8 586 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 LIPGQ9Y5X9 500 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 TRGV5A0A0B4J1U4 118 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 CPSF4LA6NMK7 179 aaKnown RBP13.81□□□□□ -0.2
TPM1-206ENST00000358278 FMO6PO60774 539 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 ZNF17P17021 662 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 PSMA4P25789 261 aaKnown RBP13.81□□□□□ -0.2
TPM1-206ENST00000358278 MST1P26927 711 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 HTR2AP28223 471 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 SLC1A3P43003 542 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 MLLT10P55197 1068 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 MERTKQ12866 999 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
TPM1-206ENST00000358278 FAM98BQ52LJ0 330 aaKnown RBP13.81□□□□□ -0.2
TPM1-206ENST00000358278 POMZP3Q6PJE2 187 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 ACER3Q9NUN7 267 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 AURKCQ9UQB9 309 aa13.81□□□□□ -0.2
TPM1-206ENST00000358278 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 OR2M5A3KFT3 312 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 C7orf72A4D263 438 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 ANKRD65E5RJM6 399 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 hCG_2039718K7EN88 272 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 TPST2O60704 377 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 TAS2R41P59536 307 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 FOXK1P85037 733 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 CHRNB3Q05901 458 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 OR1Q1Q15612 314 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 ENTPD8Q5MY95 495 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 ZNF324BQ6AW86 544 aaPredicted RBP13.8□□□□□ -0.2
TPM1-206ENST00000358278 AAGABQ6PD74 315 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 TRILQ7L0X0 811 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 GRINAQ7Z429 371 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 GTPBP8Q8N3Z3 284 aaPredicted RBP13.8□□□□□ -0.2
TPM1-206ENST00000358278 LSMEM1Q8N8F7 131 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 RNF217Q8TC41 542 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 ADAMTS16Q8TE57 1224 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 ZNF524Q96C55 264 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 GPR137Q96N19 417 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 NPAS1Q99742 590 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 AMBRA1Q9C0C7 1298 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 MAGIXQ9H6Y5 334 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 PRDM4Q9UKN5 801 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 SLC6A5Q9Y345 797 aa13.8□□□□□ -0.2
TPM1-206ENST00000358278 A0A1B0GWA3 101 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 TCRBV3S1A0A5B6 114 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 EIF4E1BA6NMX2 242 aaKnown RBP13.79□□□□□ -0.2
TPM1-206ENST00000358278 HCN1O60741 890 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 IGHG3P01860 377 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 FABP3P05413 133 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 GPIP06744 558 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 UMPSP11172 480 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 ITGA2P17301 1181 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 ADH6P28332 368 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 IFNA8P32881 189 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 HTR3AP46098 478 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 SLC25A53Q5H9E4 307 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 CYP4Z1Q86W10 505 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 NEIL3Q8TAT5 605 aa13.79□□□□□ -0.2
TPM1-206ENST00000358278 DNAJA4Q8WW22 397 aaPredicted RBP13.79□□□□□ -0.2
TPM1-206ENST00000358278 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
TPM1-206ENST00000358278 H3BML4 177 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ETV2O00321 342 aaPredicted RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 SUSD5O60279 629 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 SEMG1P04279 462 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ELK4P28324 431 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 TACR3P29371 465 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 YAP1P46937 504 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 POLR2HP52434 150 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 B3GALT5-AS1P59052 145 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 VLDLRP98155 873 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 KPNB1Q14974 876 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ALG10BQ5I7T1 473 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ARHGAP11AQ6P4F7 1023 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ULK3Q6PHR2 472 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ZDHHC21Q8IVQ6 265 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 GHDCQ8N2G8 530 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 POC1BQ8TC44 478 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 CANT1Q8WVQ1 401 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 C3orf49Q96BT1 292 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 PRRC1Q96M27 445 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms