RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PSORS1C1Q9UIG5 152 aa9.38□□□□□ -0.91
SYNE1-203ENST00000354674 IGHV1OR21-1A0A087WYE8 117 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 RHPN2P1A8MT19 583 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 C4orf51C9J302 202 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 GPR31O00270 319 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 GNB5O14775 395 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 CER1O95813 267 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SMIM10L1P0DMW3 83 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 XKP51811 444 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 FOXM1Q08050 763 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SQSTM1Q13501 440 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 PDE7AQ13946 482 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 FAM71E1Q6IPT2 247 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 IKBIPQ70UQ0 350 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 LIX1LQ8IVB5 337 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 CARFQ8N187 725 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 OR8J2Q8NGG1 315 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 C16orf78Q8WTQ4 265 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ELMOD3Q96FG2 381 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SMIM10Q96HG1 83 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 RDH12Q96NR8 316 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SPOCK3Q9BQ16 436 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ZFYVE21Q9BQ24 234 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 PAPOLGQ9BWT3 736 aaKnown RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 KLHL31Q9H511 634 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ENAMQ9NRM1 1142 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 TRAPPC4Q9Y296 219 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 AUP1Q9Y679 476 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 A0A0A6YYD5 115 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 MFSD2BA6NFX1 497 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ANXA2P2A6NMY6 339 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SCELO95171 688 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 LRATO95237 230 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 KLK1P06870 262 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 TRA2BP62995 288 aaKnown RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 LGALS3BPQ08380 585 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 MANEAQ5SRI9 462 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 OR4C11Q6IEV9 310 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ABHD17CQ6PCB6 329 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ASPGQ86U10 573 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 OR2L5Q8NG80 312 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 TRMT10AQ8TBZ6 339 aaKnown RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 PHOSPHO1Q8TCT1 267 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SFT2D1Q8WV19 159 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 SLC13A3Q8WWT9 602 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 NXPE2Q96DL1 559 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 FAM120BQ96EK7 910 aaKnown RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 FCRL4Q96PJ5 515 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 CD180Q99467 661 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 PRDM7Q9NQW5 492 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 NDRG4Q9ULP0 352 aaKnown RBP9.37□□□□□ -0.91
SYNE1-203ENST00000354674 DMDP11532 3685 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ARID1AO14497 2285 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ADAMTS9Q9P2N4 1935 aa9.37□□□□□ -0.91
SYNE1-203ENST00000354674 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 PRR33A8MZF0 331 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ADAMDEC1O15204 470 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SCN2BO60939 215 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ALPPL2P10696 532 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ANXA3P12429 323 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 PVRP15151 417 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ST6GAL1P15907 406 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 HOXB9P17482 250 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 STOMP27105 288 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 CCR6P51684 374 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SRSF11Q05519 484 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 COL28A1Q2UY09 1125 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SPANXN4Q5MJ08 99 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 OR2T5Q6IEZ7 315 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 HAGHLQ6PII5 290 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ARHGEF39Q8N4T4 335 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 C19orf47Q8N9M1 422 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 OR2T29Q8NH02 315 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 NSMAFQ92636 917 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF764Q96H86 408 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TEFMQ96QE5 360 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SLC19A3Q9BZV2 496 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 UNKLQ9H9P5 680 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 THUMPD1Q9NXG2 353 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SEC14L4Q9UDX3 406 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 NEUROG3Q9Y4Z2 214 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 PCDHGB7Q9Y5F8 929 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 PCDHGA1Q9Y5H4 931 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 NCOR1O75376 2440 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 FAM86C2PA6NEL3 165 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 EFCAB7A8K855 629 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 EIF1BO60739 113 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TBX19O60806 448 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF883P0CG24 379 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 EIF1P41567 113 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 GABRA4P48169 554 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 WNT3P56703 355 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 STXBP1P61764 594 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms